Gossypium raimondii: 105780797
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Entry
105780797 CDS
T04129
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
gra
Gossypium raimondii
Pathway
gra03440
Homologous recombination
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105780797
03460 Fanconi anemia pathway
105780797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105780797
03036 Chromosome and associated proteins [BR:
gra03036
]
105780797
03400 DNA repair and recombination proteins [BR:
gra03400
]
105780797
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105780797
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105780797
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105780797
FA (Fanconi anemia) pathway
Downstream FA components
105780797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
105780797
NCBI-ProteinID:
XP_012460756
UniProt:
A0A0D2V4H2
LinkDB
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Position
4:8097577..8104597
Genome browser
AA seq
1106 aa
AA seq
DB search
MSTWQIFSHAGTSFRWEASPPILPTKPADNPNGAPVPPLPSMADLLLQGCSKLIENGDGE
FEEYPMFRTGLGKSVALKESSIAKALSILANDDAASTVTSSKLIPANNGCGSSLFQTGSG
KMVNISSAGLVRAKTLLGLEHDNENHNFEGFQHPRRLPATNEPYDCQRFSHSGKKEDLQN
YGVMDVTSEPRHMLNSRNGLVGGELGSENDSTPMHSKMFDSAPKPPPMKFHTAGGRSLSV
SSDALKRARSLLGDPELGNFFGEMDQEVPPFTVYKEENFNDASLNKENCFFTSFPVSKDT
SKDFTSPLKSSFKQTRSIFNSENLRFGSNLIEKFDAVESSSACASAINMPSPQNALNSIN
RLSEKNFATNNSLPSGSGSQTNLPRRSFGGPLADISNNIATSQTNNKQVMNEKRRIGRSS
FVSPFKRPRCSKISAPLNNDVSLVANDDHTCCNRTVSTKYPFRVPRVYIKEYFAVPPSAC
STLKCFPIKGKQITPENAYEYLFKDETGFSRIGAEAFYDMLSHSGASVQHVSKEWVANHY
KWIVWKLACYERCYPSKCAGKFLTVSNVLEELKYRYEREVNHGQRSAIKKILEGDASPSK
MLVLCVSTIQSNSEPNMETNLEITNGTHYSGNAKVELTDGWYSINAVLDVLLSKQLAVGK
LFVGQKLRIWGAGLCGWDGPVSPLEASSAISLALNMNGTFRAHWADRLGFCKGFRIPMAF
RCIKGDGGPVPLTLVGVTRIYPVLYKERLRNGGSIVRSERMESRMVQKHNQRCSVLVDHV
ISEYQRGVNSSYIHNDSESEGAKILRILETSAEPEVLMAEMSPEQLTSFATYKSKLEATR
QLEMEKSIEKALAEAGLNERDVVPFMRVRVVGLINRNYHGKGRPKEGIITIWNPTEKQES
ELVEGQAYVVSGLIPMNSDSEILYLQARGSTNKWQPLSPLAMESFEAFFFPRKSMKLSNL
GEISLSSEFDIAAYVVYVGEVYTASHQKKQWVFVTDDSISDLLSDSLLAISFCSPSIDDD
SFAPINSNLVGSMVGFCNLIKKPKDQMNHLWVAEATENSTYYLNFKPSISHLKSAGASVQ
AWAKASSSIIDELRKKVLFVIGNCEG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtggcagattttttctcatgccggaacaagttttcgctgggaggcttcccct
cctatcctaccgactaagcctgccgataacccgaacggagctccggttcctccactccca
tccatggccgatctcctgcttcaaggatgttcgaagcttattgagaatggagatggagaa
ttcgaggaatatccgatgttcagaaccggattggggaaatcggtggcgttgaaagaatct
tcaattgcaaaagcattatctatcctcgccaacgacgacgctgcctctactgttacttca
agcaaactgattccagcgaacaatggctgcggtagctctctttttcaaacgggctctggg
aaaatggttaacatatcttcagctggtctggtcagagctaagacattgttgggacttgaa
cacgataatgagaatcacaactttgaaggttttcaacatccaaggaggttacctgcaact
aatgaaccttatgactgccaaaggttttctcattcagggaagaaagaagatttgcaaaat
tatggggttatggatgttacatcagaaccaaggcacatgttaaactctaggaatggttta
gtaggaggtgaactaggcagtgaaaatgactcaactccaatgcattccaaaatgtttgat
tcagctcccaagccacctccaatgaagtttcatactgcaggtggaagatcattgtcagtt
tcaagtgatgcattgaagcgtgcaaggagtcttcttggtgacccagagctaggaaatttc
ttcggtgaaatggatcaagaggttccaccatttacagtttacaaggaggaaaattttaat
gatgcttcattaaacaaggaaaactgtttctttacttcatttcctgtaagtaaagacaca
tccaaggatttcacatccccactgaaatcatctttcaagcaaacaaggtccatattcaat
tcagaaaatttaaggtttgggagtaatttgattgaaaaatttgatgcagttgaaagttct
agtgcatgtgcatcggccattaatatgccttctccacagaatgctttgaattcaatcaat
aggctttctgagaaaaattttgcaactaacaattctttgcctagcggttctggttcacag
actaatttgcctagaaggtcatttggtgggccattggctgatatttcaaataacattgct
acatctcaaacaaataacaaacaggttatgaatgaaaagaggagaattggaagatcaagt
tttgtttctcccttcaaaagaccccgctgttccaagatctctgctccattgaataatgat
gtttccttggtagcaaatgatgatcatacatgttgcaatagaacagtttccactaaatat
ccttttcgagtaccaagagtatatataaaggaatattttgctgtgcctccttcagcctgc
agcacgttgaagtgtttcccaatcaaaggtaaacagatcactccagagaatgcttatgag
tatttgtttaaagatgaaactggcttcagtcgaattggggcagaagctttttatgacatg
ttgtctcattctggagcttctgtgcaacatgtttctaaagagtgggtcgcaaatcattat
aagtggattgtttggaaacttgcatgctacgagaggtgctatccttccaaatgtgctgga
aaatttttaacggtctccaatgtacttgaggaattaaagtacagatatgagagggaagtc
aatcatggtcagcgttctgcaataaagaaaatacttgaaggggatgcttcgccttctaaa
atgttggtgctatgtgtttcaacaattcaatcaaattctgaaccaaatatggagaccaac
ctagagataacgaatggaactcattatagtggcaatgcaaaagtggaactaacagatggg
tggtactctataaatgctgttttggatgtattgctatcaaagcagcttgctgttggaaaa
ttgtttgtgggacagaagcttcggatatggggagcaggactttgtggctgggatgggcca
gtttcaccccttgaggcgtccagtgcaattagtttagctttgaacatgaacgggacgttt
agagctcactgggctgatcgacttggattttgtaaaggttttcgtattcctatggcattt
aggtgtatcaagggtgacgggggtccagtccctttgactttagttggagtcactcggata
taccctgttctctacaaggagaggttgagaaatgggggatcaattgttagatctgagagg
atggagagtagaatggtgcaaaagcacaatcaaaggtgctctgttctggtagatcatgtt
atatctgagtaccaaagaggggtcaacagttcttatatccataatgacagtgagagtgaa
ggagcgaaaatcttaaggattcttgagacatctgctgagccagaagtccttatggcagaa
atgagcccggagcaactaacttcctttgctacatataaatcaaaacttgaggctactagg
cagttagagatggagaaatcaattgagaaagctctggcggaggctggattaaatgagcga
gatgttgttccattcatgagggttagagttgttggattaattaataggaattatcatgga
aagggaagacctaaagaaggaataataaccatttggaatccaacagaaaagcaggaaagt
gagctggttgagggacaggcatatgtcgtttctggacttataccaatgaactcagattcg
gaaatcctttacttacaagcccgaggatctaccaacaaatggcagcccctatctcccctg
gcaatggaaagttttgaggcatttttcttcccacgaaagtcgatgaagttgtcaaattta
ggtgaaatttctctttccagtgagtttgacattgctgcatatgttgtgtatgtgggagaa
gtctatacagcttctcatcagaagaaacagtgggtgtttgtgacagatgattccatttcc
gatttactgtcagattctttacttgccatcagtttttgctcaccatccattgatgatgac
tcgtttgcaccaatcaactctaacttagtgggatccatggtaggcttctgtaaccttatc
aagaaaccaaaggatcaaatgaatcatctctgggttgctgaagcaacagaaaattctaca
tattatttaaattttaaaccctcaatatctcacctcaaaagtgccggcgcttctgttcag
gcatgggcaaaggcctctagctcgattattgacgaactccgcaagaaggttttatttgta
attggcaattgtgaaggctag
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