KEGG   Gossypium raimondii: 105780797
Entry
105780797         CDS       T04129                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
gra  Gossypium raimondii
Pathway
gra03440  Homologous recombination
gra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105780797
   03460 Fanconi anemia pathway
    105780797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105780797
   03036 Chromosome and associated proteins [BR:gra03036]
    105780797
   03400 DNA repair and recombination proteins [BR:gra03400]
    105780797
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    105780797
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     105780797
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     105780797
   FA (Fanconi anemia) pathway
    Downstream FA components
     105780797
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical Tower
Other DBs
NCBI-GeneID: 105780797
NCBI-ProteinID: XP_012460756
UniProt: A0A0D2V4H2
LinkDB
Position
4:8097577..8104597
AA seq 1106 aa
MSTWQIFSHAGTSFRWEASPPILPTKPADNPNGAPVPPLPSMADLLLQGCSKLIENGDGE
FEEYPMFRTGLGKSVALKESSIAKALSILANDDAASTVTSSKLIPANNGCGSSLFQTGSG
KMVNISSAGLVRAKTLLGLEHDNENHNFEGFQHPRRLPATNEPYDCQRFSHSGKKEDLQN
YGVMDVTSEPRHMLNSRNGLVGGELGSENDSTPMHSKMFDSAPKPPPMKFHTAGGRSLSV
SSDALKRARSLLGDPELGNFFGEMDQEVPPFTVYKEENFNDASLNKENCFFTSFPVSKDT
SKDFTSPLKSSFKQTRSIFNSENLRFGSNLIEKFDAVESSSACASAINMPSPQNALNSIN
RLSEKNFATNNSLPSGSGSQTNLPRRSFGGPLADISNNIATSQTNNKQVMNEKRRIGRSS
FVSPFKRPRCSKISAPLNNDVSLVANDDHTCCNRTVSTKYPFRVPRVYIKEYFAVPPSAC
STLKCFPIKGKQITPENAYEYLFKDETGFSRIGAEAFYDMLSHSGASVQHVSKEWVANHY
KWIVWKLACYERCYPSKCAGKFLTVSNVLEELKYRYEREVNHGQRSAIKKILEGDASPSK
MLVLCVSTIQSNSEPNMETNLEITNGTHYSGNAKVELTDGWYSINAVLDVLLSKQLAVGK
LFVGQKLRIWGAGLCGWDGPVSPLEASSAISLALNMNGTFRAHWADRLGFCKGFRIPMAF
RCIKGDGGPVPLTLVGVTRIYPVLYKERLRNGGSIVRSERMESRMVQKHNQRCSVLVDHV
ISEYQRGVNSSYIHNDSESEGAKILRILETSAEPEVLMAEMSPEQLTSFATYKSKLEATR
QLEMEKSIEKALAEAGLNERDVVPFMRVRVVGLINRNYHGKGRPKEGIITIWNPTEKQES
ELVEGQAYVVSGLIPMNSDSEILYLQARGSTNKWQPLSPLAMESFEAFFFPRKSMKLSNL
GEISLSSEFDIAAYVVYVGEVYTASHQKKQWVFVTDDSISDLLSDSLLAISFCSPSIDDD
SFAPINSNLVGSMVGFCNLIKKPKDQMNHLWVAEATENSTYYLNFKPSISHLKSAGASVQ
AWAKASSSIIDELRKKVLFVIGNCEG
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgtctacgtggcagattttttctcatgccggaacaagttttcgctgggaggcttcccct
cctatcctaccgactaagcctgccgataacccgaacggagctccggttcctccactccca
tccatggccgatctcctgcttcaaggatgttcgaagcttattgagaatggagatggagaa
ttcgaggaatatccgatgttcagaaccggattggggaaatcggtggcgttgaaagaatct
tcaattgcaaaagcattatctatcctcgccaacgacgacgctgcctctactgttacttca
agcaaactgattccagcgaacaatggctgcggtagctctctttttcaaacgggctctggg
aaaatggttaacatatcttcagctggtctggtcagagctaagacattgttgggacttgaa
cacgataatgagaatcacaactttgaaggttttcaacatccaaggaggttacctgcaact
aatgaaccttatgactgccaaaggttttctcattcagggaagaaagaagatttgcaaaat
tatggggttatggatgttacatcagaaccaaggcacatgttaaactctaggaatggttta
gtaggaggtgaactaggcagtgaaaatgactcaactccaatgcattccaaaatgtttgat
tcagctcccaagccacctccaatgaagtttcatactgcaggtggaagatcattgtcagtt
tcaagtgatgcattgaagcgtgcaaggagtcttcttggtgacccagagctaggaaatttc
ttcggtgaaatggatcaagaggttccaccatttacagtttacaaggaggaaaattttaat
gatgcttcattaaacaaggaaaactgtttctttacttcatttcctgtaagtaaagacaca
tccaaggatttcacatccccactgaaatcatctttcaagcaaacaaggtccatattcaat
tcagaaaatttaaggtttgggagtaatttgattgaaaaatttgatgcagttgaaagttct
agtgcatgtgcatcggccattaatatgccttctccacagaatgctttgaattcaatcaat
aggctttctgagaaaaattttgcaactaacaattctttgcctagcggttctggttcacag
actaatttgcctagaaggtcatttggtgggccattggctgatatttcaaataacattgct
acatctcaaacaaataacaaacaggttatgaatgaaaagaggagaattggaagatcaagt
tttgtttctcccttcaaaagaccccgctgttccaagatctctgctccattgaataatgat
gtttccttggtagcaaatgatgatcatacatgttgcaatagaacagtttccactaaatat
ccttttcgagtaccaagagtatatataaaggaatattttgctgtgcctccttcagcctgc
agcacgttgaagtgtttcccaatcaaaggtaaacagatcactccagagaatgcttatgag
tatttgtttaaagatgaaactggcttcagtcgaattggggcagaagctttttatgacatg
ttgtctcattctggagcttctgtgcaacatgtttctaaagagtgggtcgcaaatcattat
aagtggattgtttggaaacttgcatgctacgagaggtgctatccttccaaatgtgctgga
aaatttttaacggtctccaatgtacttgaggaattaaagtacagatatgagagggaagtc
aatcatggtcagcgttctgcaataaagaaaatacttgaaggggatgcttcgccttctaaa
atgttggtgctatgtgtttcaacaattcaatcaaattctgaaccaaatatggagaccaac
ctagagataacgaatggaactcattatagtggcaatgcaaaagtggaactaacagatggg
tggtactctataaatgctgttttggatgtattgctatcaaagcagcttgctgttggaaaa
ttgtttgtgggacagaagcttcggatatggggagcaggactttgtggctgggatgggcca
gtttcaccccttgaggcgtccagtgcaattagtttagctttgaacatgaacgggacgttt
agagctcactgggctgatcgacttggattttgtaaaggttttcgtattcctatggcattt
aggtgtatcaagggtgacgggggtccagtccctttgactttagttggagtcactcggata
taccctgttctctacaaggagaggttgagaaatgggggatcaattgttagatctgagagg
atggagagtagaatggtgcaaaagcacaatcaaaggtgctctgttctggtagatcatgtt
atatctgagtaccaaagaggggtcaacagttcttatatccataatgacagtgagagtgaa
ggagcgaaaatcttaaggattcttgagacatctgctgagccagaagtccttatggcagaa
atgagcccggagcaactaacttcctttgctacatataaatcaaaacttgaggctactagg
cagttagagatggagaaatcaattgagaaagctctggcggaggctggattaaatgagcga
gatgttgttccattcatgagggttagagttgttggattaattaataggaattatcatgga
aagggaagacctaaagaaggaataataaccatttggaatccaacagaaaagcaggaaagt
gagctggttgagggacaggcatatgtcgtttctggacttataccaatgaactcagattcg
gaaatcctttacttacaagcccgaggatctaccaacaaatggcagcccctatctcccctg
gcaatggaaagttttgaggcatttttcttcccacgaaagtcgatgaagttgtcaaattta
ggtgaaatttctctttccagtgagtttgacattgctgcatatgttgtgtatgtgggagaa
gtctatacagcttctcatcagaagaaacagtgggtgtttgtgacagatgattccatttcc
gatttactgtcagattctttacttgccatcagtttttgctcaccatccattgatgatgac
tcgtttgcaccaatcaactctaacttagtgggatccatggtaggcttctgtaaccttatc
aagaaaccaaaggatcaaatgaatcatctctgggttgctgaagcaacagaaaattctaca
tattatttaaattttaaaccctcaatatctcacctcaaaagtgccggcgcttctgttcag
gcatgggcaaaggcctctagctcgattattgacgaactccgcaagaaggttttatttgta
attggcaattgtgaaggctag

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