Gossypium raimondii: 105780817
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Entry
105780817 CDS
T04129
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105780817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105780817
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105780817
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
105780817
NCBI-ProteinID:
XP_012460783
UniProt:
A0A0D2V2C1
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Position
4:complement(42066579..42069220)
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AA seq
714 aa
AA seq
DB search
MNSVLPSFRYLPSTSTTNATATRPTPQSKDNDNTDFSLLWHYQILDPGSDIVSYWNHVFL
IVCIMALFIDPLYFFLPYVGGPACLASDSSMGVFITVLRSMADLLYLFNMVIKFRTGFIA
PNSRVFGKGELVMDAREIAIRYLKKDFIIDLAATLPLPQFVIWVLIPTTRHSRTDHANNT
IALIVLLQYVPRLFIIFPLNSKIIKSNGIIAKTAWAGAVYNLLLYVLASHVLGAIWYLCS
IARQFSCWKEECAKENALKVIACIPSFLDCNSLVKPEREYWANVTNVLNNCDASNEETDF
KFGMFAAAFTTDVASKNFVIKYLYCLWWGIRNLSSYGQNLETTIYIWENVFAIAICLLGL
VLFALLIGNMQTSLQSMTVRIEEWRLKRRDTEEWMRHRQLPEDLQERVRRFVQYKWLATR
GVDEEFILQSLPLDLRREIQRHLCLSLVRRVPFFAQMDDQLLDAMCERLVSSLSTEGNYI
VREGEPVNEMLFIIRGQLESSTTGGGRTGFFNSITLRPGDFCGEELLTWALMPNSTLNLP
LSTRTVQAVSEVEAFALQADDLQFFAHQFKRLQSKKLQHAFRYYSHQWRTWGACFIQAAW
RRFKKRKMAKELIKRENSFYYRTLGDQDDYHYDIDDMEEGLLDHEDYIDGISSSSMDNQQ
NFQLGATILASKFAKNTKKGSKVPLIDSSADSLKMPKLFKPDEPDFSVDHIENV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtactcccttcgttccgctacttaccttccacctccaccaccaacgccacc
gccacacgtcctacaccacaatccaaagacaatgataataccgacttctccctactatgg
cattaccaaatattggaccccggcagcgacattgtttcctattggaaccatgtgttcttg
attgtttgcattatggcgttgttcatagaccctctttacttcttcctcccttacgtgggg
ggacctgcatgcttggcctccgactccagcatgggggtcttcatcactgttttaaggtct
atggccgatcttttatatcttttcaacatggtcatcaagtttaggacggggttcattgcc
cccaattctagggttttcggaaagggtgagcttgttatggatgccagggagattgcgata
cggtacttgaagaaggattttatcattgatcttgcagctaccttaccactacctcagttt
gtgatatgggtattgattccaaccacaagacactcaagaacggatcatgcaaacaacacc
attgctcttattgtgctccttcaatatgttccaaggttgtttattatcttccctcttaac
tcaaagatcatcaaatccaatggaataattgccaaaacagcttgggctggtgctgtatac
aatctccttctctatgtcctcgccagtcatgtattgggagcaatatggtatctgtgttca
atagcgaggcaattctcgtgttggaaagaggaatgcgcgaaggagaatgccttgaaggtg
attgcttgcatcccaagtttcctggattgcaatagcttggtgaaaccggagagggaatat
tgggcgaatgtgaccaacgtgctcaacaactgcgatgcctccaacgaagagactgatttc
aaatttggaatgtttgcagctgccttcactactgacgttgcttccaaaaactttgttatc
aagtacttgtactgcctttggtggggtatcagaaatttaagttcatatgggcaaaatttg
gagacaaccatatatatttgggagaatgttttcgcaattgccatatgtttattaggattg
gttctgttcgcactcttgattggcaacatgcagacatcattgcaatcaatgactgtaagg
attgaggagtggagacttaaacgaagggatacagaggagtggatgaggcatcgtcagtta
cctgaagatttgcaagaacgtgttcgacgatttgttcaatacaaatggctagccactcga
ggtgtcgatgaagagtttatattgcaatctttgccgttggatctccgccgcgaaattcaa
cgccacttgtgcctttctcttgttcgccgtgttcctttcttcgcacaaatggatgaccaa
cttttggacgcgatgtgtgagcgcctagtctcgtcgttgagtaccgagggcaattacatc
gtccgagaaggagaaccggtcaatgagatgctcttcatcatccgaggccaacttgagagc
tccacgactggtggaggaagaaccggcttcttcaactccatcaccctccggccgggtgat
ttttgtggtgaagagcttctcacatgggctctaatgcccaactccaccctcaacctgccc
ctctcaactcgaaccgtccaagcagtttcggaagttgaagcttttgcactccaagccgat
gacctccagttcttcgcacatcaattcaaaaggcttcaaagcaagaagctccagcacgca
ttccgatactattctcatcaatggcgaacgtggggcgcatgtttcatacaagctgcttgg
agaaggtttaagaagaggaagatggcgaaagagttgattaaaagagagaacagtttctat
tacaggacattgggtgatcaagatgattatcattacgacattgatgatatggaagaaggg
ttactggaccatgaagattacattgacggaatatcatcatcatccatggataatcaacaa
aattttcaacttggggcaaccattttagcttcaaagtttgctaaaaacactaaaaaagga
tctaaagttcctttgattgattcctctgctgatagtttaaagatgcccaagttgtttaaa
ccagacgagcctgatttctcggtagaccatattgaaaatgtttag
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