Gossypium raimondii: 105781182
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Entry
105781182 CDS
T04129
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105781182
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105781182
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105781182
NCBI-ProteinID:
XP_012461187
UniProt:
A0A0D2SAF7
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Position
13:10220983..10222672
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AA seq
437 aa
AA seq
DB search
MGIAGYSYSWFLLSFFVLIPTLEAHIAEYDEYWKARELEATENLNKAYFPNPEEVVQHYN
DHFARTMLEFNSTRRALKGKKKGPCEITNPVDSCWRCDPNWEKNRKRLADCAPGFARGTI
GGKHGKFYVVTDPSDDIANPKPGTLRHAVTQLRPLWITFKKSMIIKLEQELIVTSDKTID
ARGANVHICKGAGITIQFARNVIIHGLHIHHIKPGNGGMIRDTENHIGLRTASDGDGISL
FGATNIWLDHLSLYDCFDGLIDVIQGSTAVTISNCHFTDHTDVMLFGASDSYVADEKMQI
TVALNHFGKGLVGRMPRCRLGFIHVVNNDYTHWFMYAIGGSSHPTIISQGNKYSASGSYV
TKEVTSRGYLPPEQWKKWNWVSQGDQFKNGAYFTPSGDPNASKLFGANKMMPFKPGRLVP
KLTRYAGTLHCRTGRPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgctggttatagttatagttggtttctattgtcatttttcgtcctaatccca
accctagaagctcacatcgctgaatatgatgagtattggaaggcacgagaattggaagcc
actgagaacctgaacaaggcttatttccccaatccggaggaagtggtccagcattataat
gaccactttgctaggaccatgcttgagtttaatagcaccagaagggcattgaaaggaaag
aaaaaaggtccttgcgagattaccaaccccgttgatagttgttggcgatgtgatcctaac
tgggaaaagaataggaagaggctggctgactgtgcccctggatttgctcgtggtactatt
ggtggaaagcacggaaagttttacgtggtcactgaccctagtgatgatattgctaacccc
aagcccggaactctacgtcatgctgtcacccaactcaggccactttggatcactttcaaa
aaatccatgatcatcaagctggaacaggagctcattgttacaagcgacaagaccattgat
gcgaggggagccaatgtgcatatttgcaaaggtgctggtattactatccagtttgctagg
aatgtcattatccacggcctccatatccatcacattaaacctggcaatggtggcatgatc
agagatactgaaaaccacattgggttaaggactgccagcgacggagatgggatctctctt
ttcggagcaaccaacatttggctcgaccatctttccctttacgattgtttcgatggcctt
atcgatgttattcaaggttccactgccgttaccatttccaattgccatttcactgaccac
accgatgtgatgttgttcggagcaagtgactcctatgttgccgacgagaagatgcagatc
actgttgctttgaaccacttcggtaaaggattggtagggaggatgcctagatgtcgatta
ggttttattcatgtcgtcaataatgactacactcactggttcatgtatgccattggtggt
agcagccaccctacaattataagccagggtaataagtattccgcgtcaggaagctacgtg
actaaggaggtgactagtaggggctacttgccacctgagcagtggaagaaatggaactgg
gtatcacaaggtgaccagttcaagaatggtgcctattttactccatccggtgatccgaat
gcatccaagctatttggcgccaacaaaatgatgcctttcaaacccggtcgattggtcccc
aaactcacaaggtatgctggaacactccactgtagaaccggccgcccttgctaa
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