Gossypium raimondii: 105781708
Help
Entry
105781708 CDS
T04129
Name
(RefSeq) class V chitinase CHIT5a
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
gra
Gossypium raimondii
Pathway
gra00520
Amino sugar and nucleotide sugar metabolism
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105781708
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
105781708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Glyco_hydro_85
MACPF_D3
Antimicrobial10
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
105781708
NCBI-ProteinID:
XP_012461678
LinkDB
All DBs
Position
13:complement(54189417..54190874)
Genome browser
AA seq
410 aa
AA seq
DB search
MAKQRISSLFLAIIVLILVASVSFSTARNYQPTWDTRSPTLNCVAPSPSPKPAPSPSPYP
DDVIKGGYWPSWLAYSLPPSSIPTLYFTHVFYAFVGIDASSYGLSITQPDAQWMGNFTAT
LHAKKPLAQALLAIGGANSGSGIFSKMVSNPDNRAAFIKSTIATARKYGFDGLDIDWEFP
NNPTDMSNLEVFFKEWREAVESEASASSKPPLLLSAAVYFASSFFLDLPRTYPTDAIAKY
LDFVNPMCFDYHGSWDTSVTGEHALLYDKTSNISTSYGISSWIEAGVPPKKLVMGMPLYG
KSWELKHPKNHGIGAPANGVGPGNNGIMLYSDIVKYNDEHYAHVVYDGDTVSEYSYSGTD
WIGYDGPTSVEKKVEYAKTQNLGGYFFWALGYDMNWTLSGIASNTWERMH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaaagaatatcatcattgttcttggccattattgtattaattctcgttgca
agtgtctccttctccactgctcgtaattaccagccaacgtgggatacacgatcccctacg
cttaactgtgtagcaccatctccgtcaccaaaaccggctcctagtccttcaccttatcct
gatgatgtgatcaagggtggctattggccttcatggctagcttatagtctcccaccatcc
tcaatccctaccttgtacttcacacatgtgttttatgcttttgttggcattgatgcttct
tcttacggtttgtccatcacccaacctgatgctcagtggatgggaaactttacagccacc
cttcatgccaaaaagccactggcacaagccttgttagcgattggaggagcgaattccggt
tccggtattttttccaagatggtcagtaaccctgataatcgtgccgctttcataaaatcc
accattgctacggcaaggaaatatggctttgatggacttgacattgattgggagtttcct
aataacccaactgacatgtcgaaccttgaggttttcttcaaagaatggcgtgaggctgtt
gagagtgaggcttcggcttctagcaagcctcctcttcttttaagtgctgctgtttatttc
gcttcaagctttttcttagatctgcctagaacataccctactgatgccattgcaaaatac
cttgattttgtaaatcctatgtgctttgattaccatggaagttgggacacttcagtcact
ggtgaacatgctctactctacgacaaaactagcaatataagcacaagttatggtatatca
tcatggattgaagctggtgtccctccaaagaagctggttatggggatgccactttatgga
aaatcgtgggagctgaaacaccccaaaaaccatgggatcggagcgcctgctaatggtgtc
gggccgggaaacaatggcataatgttgtacagtgatattgtaaaatacaatgatgaacac
tatgcccatgtagtgtatgacggagatactgtatcggaatattcgtactcgggaaccgat
tggatcggttatgatggaccgacatctgtggaaaagaaggttgagtatgctaagactcag
aatcttgggggttacttcttttgggcccttggatatgacatgaactggacactttcagga
attgcatcaaatacatgggaacgaatgcactag
DBGET
integrated database retrieval system
