Gossypium raimondii: 105782070
Help
Entry
105782070 CDS
T04129
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
gra
Gossypium raimondii
Pathway
gra03420
Nucleotide excision repair
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105782070
09124 Replication and repair
03420 Nucleotide excision repair
105782070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105782070
03400 DNA repair and recombination proteins [BR:
gra03400
]
105782070
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105782070
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105782070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WD_LRWD1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
105782070
NCBI-ProteinID:
XP_012462005
UniProt:
A0A0D2VKE6
LinkDB
All DBs
Position
13:complement(57972959..57977257)
Genome browser
AA seq
545 aa
AA seq
DB search
MAPQVRRTAFPKVLIERDTDSEQSSSDDDEEEEEQENENEEKTEEFNDTKKKGKSPITIS
LKKVCKVCKKTGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVATEHGVVPAPHVN
TQNPVEFVFERQLKPRITPIKPAYVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLSGDK
KGQLGIWDFAKVHEKTVYGNIHSCILNNMRFSPSNDGMIYAASSDGTVSCTDLETGISST
LMNLNPDGWQGPGSWRMLYGMDINLERGVVLVADNFGFLYLVDSRSNSQTGKAIMIHKKG
SKVVGLHCNPFQPDLLLSCGNDHFARLWDMRRLEAGSVLANLEHRRVVNSAYFSPFSGTK
ILTTSQDNRLRIWDSIFRDLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYI
SENYNGTALHPIDFIDINTGQLVAEVMDPNITTITPVNKLHPRDDILASGSSRSLFIWRP
KEKFDVAEQSDTRKIIIFGGDEKKRGKRSKDDYDDDSDDDKFNVKGKNVKVKKPVKQMTH
RKAKR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcaagtaagaagaacggcgttccctaaggtacttattgagagagatacagac
tctgaacaaagctcatcagatgatgatgaggaggaagaagaacaagaaaatgaaaacgaa
gagaaaactgaggagtttaatgatacgaaaaagaaaggaaaatcacccattactattagc
ctcaagaaagtttgtaaagtgtgtaagaaaacgggacatgaagctgggtttaaaggagct
acctatattgattgcccaatgaaaccttgttttctttgcaaaatgcctggtcatactaca
atgacatgtccacatagagttgctacagagcatggtgttgtccctgcaccccatgtaaat
actcagaaccccgtggaatttgtgttcgagcgacaacttaaacctagaattaccccgatc
aagccggcgtatgtgatcccggatcaagtcgattgtgctgttatccgataccacagtaga
agagtaacgtgtttggagtttcatcccactaacaatcacatccttttgtctggagataag
aaaggacaactcggaatttgggattttgcaaaagtgcatgaaaagacggtttacggaaac
atacactcttgcatactcaataatatgaggttcagtccttcaaatgatggtatgatatat
gctgcatcttcggatggaaccgtcagttgcacagacttagagaccgggatttcatcgact
ttaatgaatcttaatccagatggttggcagggtccggggagttggaggatgctttacgga
atggatatcaacttggagagaggtgttgtgcttgtggctgataactttggtttcctctac
ttggttgatagtcgctccaacagccaaaccgggaaggcaataatgatccataagaaagga
agtaaagtcgtcggtctacactgtaatccttttcaaccagatcttttgttgagttgtgga
aacgatcactttgcccgtttgtgggatatgcgtcgattagaagctggatctgttcttgct
aatctcgagcatagacgtgttgtgaactccgcctatttctctccattttctgggactaaa
atccttaccacgtctcaagataatcgccttcgcatatgggattccatcttccgggatttg
gactcaccgagtcgggaaatcgtacatagtcatgatttcaatcggcatttgactcctttc
cgagctgaatgggatcctaaggatccatcagaatctctagctgttatcggtcgttacata
agtgaaaattataacggaactgctctacaccctatcgatttcatagacataaacacgggg
caattagtagccgaggttatggacccgaacattactactatcactcccgtgaacaaacta
catccacgagacgatattttggcatcgggtagttcaaggtctctttttatttggagacca
aaggagaagtttgacgttgcggaacagtcagatacgaggaaaatcatcatctttggagga
gatgagaaaaagcggggcaagaggtcaaaagatgattacgatgatgattccgatgatgat
aaattcaacgtcaaaggcaaaaacgtaaaggtcaagaaacccgtaaagcaaatgactcat
cgaaaggcgaagcgctga
DBGET
integrated database retrieval system
