Gossypium raimondii: 105782105
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Entry
105782105 CDS
T04129
Name
(RefSeq) ubiquitin receptor RAD23c isoform X2
KO
K10839
UV excision repair protein RAD23
Organism
gra
Gossypium raimondii
Pathway
gra03420
Nucleotide excision repair
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105782105
09124 Replication and repair
03420 Nucleotide excision repair
105782105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gra03051
]
105782105
03400 DNA repair and recombination proteins [BR:
gra03400
]
105782105
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105782105
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105782105
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
UBA_3
Ubiquitin_4
TECR_N
MmeI_C
Crinkler
Motif
Other DBs
NCBI-GeneID:
105782105
NCBI-ProteinID:
XP_012462059
UniProt:
A0A0D2W3V8
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Position
13:9535239..9602004
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AA seq
384 aa
AA seq
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MKVSVKTLKGTHFDIEVKPEDAVADVKKNIETVQGADVYPAAQQMLIFKGKVLKDDTTLA
ENSVNENSFIVIMLTKNKGASGECSTASTAPTKKAPEASSLPTATVPASTAPVVTSAAAA
PPAESAPVASSTPLSDSDVYGQTASNLVAGSNFEGTIQQILDMGGGTWDRDTVVRALRAA
YNNPERAVEYLYSGIPEQADATPVAHAPVVGQTTSPAEPPQQPAQMAAIPTSGPNSNPLD
LFPQGLPNMGASGAGAGSLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPNLVRLI
QEHQGDFLRLINEPAEGGEGNILGQLAEAMPQAVQVTPEEREAIERLEAMGFDRATVLQV
FFACNKNEELAANYLLDHMHDFQD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttccgtcaaaactctcaaaggcactcacttcgatatcgaagtcaaacccgaa
gatgcggttgcagatgtaaaaaagaacatagaaactgttcaaggggctgatgtttatcct
gctgcacaacaaatgcttatctttaagggaaaagttcttaaagatgacacgacactggct
gaaaacagtgtcaatgaaaatagctttattgtgatcatgttgacaaagaataagggtgca
tctggtgagtgttcaactgcttcaacagctcctacaaagaaagctcctgaggcaagtagt
ctgccaacagctacagtaccagcttcgactgcacctgttgtgacgtctgctgcggctgca
cctcccgctgaatctgctcctgttgcttcaagtactcctctgtcagattctgatgtttat
ggccaaacagcatctaatttggttgcagggagtaacttcgagggaacaatccaacaaatt
cttgacatgggtggagggacctgggacagggacactgttgtccgcgcccttcgcgctgct
tataataacccagagagagctgttgaatatttgtattctggcatccctgagcaagctgac
gctacacctgtggcccatgctcctgtagttgggcaaaccactagccctgcagaaccacct
caacagcctgcacaaatggcagctattcctacaagtggaccaaattcaaatccattagac
ctctttccccagggccttccgaacatgggtgcaagtggtgctggggctggctctcttgat
tttttacggaacagtccacagtttcaagctttgcgagcgatggtgcaagccaacccacaa
atattgcagcctatgcttcaagagttggggaaacaaaatcctaatctagtgagacttatt
caagagcatcagggtgactttcttcgcctgatcaatgaacctgctgaaggtggagaggga
aacattttggggcaattagctgaggcgatgccacaagctgtgcaagtcacacctgaagag
cgtgaagccatagaacggcttgaagcaatggggtttgaccgtgcaactgtgctccaagtg
ttctttgcgtgcaacaagaatgaggaacttgcagccaactaccttttagatcatatgcat
gattttcaggattga
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