Gossypium raimondii: 105782210
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Entry
105782210 CDS
T04129
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105782210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105782210
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105782210
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
105782210
NCBI-ProteinID:
XP_012462236
UniProt:
A0A0D2VGU9
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Position
13:53975898..53982014
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AA seq
743 aa
AA seq
DB search
MFDCGHKAQYMSGQREKFVRLDDLDSRSSSPSAAGLKNCGFNIEGLGRSGHANNTTSRSF
KRGIRKGSEGLKSIGRSLGFGVSRVVFPEDLKVSEKKIFDPQDKFLLLCNKLFFISCILA
VSVDPLFFFLPVINDPEKCLTIDKSLAVTATTLRTIIDAFYLIRMALQFRTAYIAPSSRV
FGRGELVIDPARIAKRYMLQYFFLDFLAVLPLPQIVVWRFLHGSNGSDVLATKQALFFIV
LFQYIPRFLRVIPLTSEMKRTTGVFAETAWAGAAYYLLLYMLCSHIVGAFWYWVAVERND
TCWQKACKDIGRDKCNTNFLYCGNQHMEGYGVWNNTKDTVLKEKCPADDNIDNPPFDFGI
FTHALSSGIVSSTKFFSKYCYCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIFGLILF
ALLIGNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVD
EENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVRE
GDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKTGASLPTST
RTVKALTEVEAFALIAEELKFVAGQFRRLHSRQVQHTFRFHSQQWRTWAACFIQAAWRRY
SKRKIMEELRRKEEEEEAAAAGSDGTRNNSGGGSYSIGATFLASKFAANALRGIHRNRNA
KSAKELVKLQKPPEPDFTAEDGD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggtcataaagctcagtatatgagtggacaaagggagaagtttgtcagg
ttggatgacttggactctagatcatcatcaccctctgctgcaggattgaaaaattgtggg
tttaacattgagggattaggtcgttctggccatgcaaacaatacaacgtctagatctttc
aagagagggatcagaaagggatctgaaggacttaagtcaattggtcgctcacttggattt
ggggtttctcgagttgtgtttcctgaggatcttaaagtatcagaaaagaaaatatttgat
ccgcaggataaattcctcttgctatgcaataaattatttttcatatcgtgtattctggct
gtatcagtggaccctctatttttttttcttcctgttattaatgatccagaaaagtgtctt
actattgataaaagtttagcagtcactgcaaccactctgcggacgattatagatgctttt
tatcttatccgcatggctcttcagttccgtactgcttacattgcaccgtcttctcgagtt
tttggacgaggtgaacttgtgattgatcctgcacgaatagccaagcgatacatgctgcaa
tatttcttccttgattttcttgctgtgcttccattaccacagattgttgtttggcgattt
cttcatggttccaatggttcagatgtgctagcaacaaaacaggccttgtttttcatcgtc
ttgtttcagtatatccctcgatttcttagagttatacccttaacatcagaaatgaaaagg
acaacaggtgtctttgctgaaactgcttgggctggagctgcatattatttgttattatat
atgctttgtagtcatatagtaggggcattctggtactgggtagccgtagaacgaaatgat
acttgctggcagaaggcttgtaaggatattggtagggataaatgcaatacaaatttctta
tactgcgggaatcagcatatggaaggttatggagtatggaataataccaaagacactgtt
cttaaagaaaagtgcccagctgatgacaatattgataatcctccatttgatttcggaatc
ttcacacatgctttgtcatctggtattgtttcatcaacaaagttcttttccaaatactgc
tactgtttatggtggggtctacagaatttgagtacccttggccagggacttgaaactagc
acctaccctggtgaggtcatattctccatcgcacttgccatttttggactcattctcttt
gcgcttctgattggaaacatgcagacctatcttcaatctctcaccattcggctagaagaa
atgaggattaaaaggcgtgattcagaacaatggatgcatcatcgtatgcttccccaggac
ttgagggaacgggtgaggcgttatgaccaatacaagtggttggaaacacgtggtgttgat
gaagagaacttggtccagagcctcccaaaggatctgaggagagatattaagaggcacctc
tgtctggctttggttagaagggttcctctgtttgagagtatggatgagagattgcttgat
gccatttgtgaacggctgaaaccatgcctgtttactgagagcacctacatagtccgagag
ggggatcctgttgatgagatgctattcattattcgtggccgtcttgagagtgtaacaaca
gatggtggaaggagtgggtttttcaaccgcagtttgctgaaagaaggagatttctgtgga
gaggaacttctaacttgggcattggatcccaaaaccggtgctagccttccaacatctact
cggacagtgaaggctttaactgaggtcgaagcttttgccctcatagctgaggaattaaaa
tttgttgccggtcaattcaggcgtcttcacagtagacaggtacaacatacattccgtttt
cattcacagcagtggagaacctgggcagcttgctttatccaagctgcttggcggcgttat
tccaagaggaagatcatggaggagcttcgtcgtaaggaagaagaagaggaagcagcagca
gcaggatcagatggaacccgcaataacagcggtggaggttcatacagcatcggtgctact
ttcttagcttccaagtttgctgcaaacgcacttcgtggcattcatcggaaccggaacgct
aagagcgcaaaggagttggtgaaactacaaaagcctccggaacctgattttactgctgaa
gacggagattga
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