Gossypium raimondii: 105782377
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Entry
105782377 CDS
T04129
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105782377
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105782377
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105782377
NCBI-ProteinID:
XP_012462524
UniProt:
A0A0D2W377
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Position
13:complement(5461603..5471657)
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AA seq
711 aa
AA seq
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MGSTFFSIPIKRTMPDPTHSANGPSKRSKPPSTTLYIPPGQVAFRLLCHVSRVGGIIGKS
GSVIKQLQQATGTKIRIEDAPAECPDRVITIIGPNAVNTKVVLDLGGDGEGGSRVEEIEV
SKAQEALVKVFERILEVAAESNGATLGMVSCRLLAEVKQAGGVIGKGGKVVEKIREETGT
KIRVLTDNLPACASLKEEIVEIEGAVLAVKKALVAVSHRLQDCPSVSKTRAIENRSIEPI
LTETLHRPIDLLPRESLRRAIEVYPQETSHKHIEVVPQDPFRRPIDVIPQESFHRHIEAG
SHEALPDLHVDHLSQRSSMVPSIPSDSTSYATKIHPLSLKPEKAPPLDTRTFQQEVVFKI
LCFSDRVGCVIGKGGATIKALQSDTGATVTIGAAITDCDERLVTVTASENPESQYSPAQK
AVVLVFVKVFEASIEKGLDSGAGKGSNVTARLVVPSTQVGCLLGKGGAVISEMRKATSTS
IRILGKDQVPKCVSENDQVVQISGGYSNVKDAIYHVTGTLRDNHFSTSMRTVGAKSSSSV
LTETSPYERFLDNSPLELQASSGVSHSLGWHTSLAMSNTDSFGLSYSLDRPRSPGLWTSE
MATGLNPRSIIDSGRGLTSFRGGLELGSGNKSAVVTNTTVEIRVPENVIDSVYGENGRNL
ARLREISGAKVIVHEPQIGTSDRIVVISGTPDQTQAAQSLLQAFILTGPTR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaccttcttctctataccaataaagcgaaccatgcccgacccgacccattct
gctaacggaccctccaagcgttccaagcctccgtctactactctctacatccctcccggc
caggtggccttccgtctcctttgtcacgtgtcgcgtgtcgggggcatcatcggcaagtcg
ggcagcgtcatcaagcaactgcaacaggctacgggtaccaagatccgaatcgaggatgcc
ccggccgaatgccccgaccgggttattaccatcataggtcctaatgctgttaataccaag
gttgtgcttgaccttggcggcgacggtgagggtggtagtagagttgaggaaatcgaggtg
tccaaggcgcaggaggcgctggtgaaggtattcgagaggattctggaggtggcggctgag
agcaatggggcaaccttggggatggtttcttgtcggttgttggcagaggttaagcaagct
gggggtgtgattgggaaaggtggtaaagtagtggagaagataagggaagaaactgggacc
aaaattagggttttgacggataatctaccggcttgtgctagccttaaggaggagattgtg
gagattgaaggagctgttttagctgtaaaaaaggcgcttgttgctgtctcacaccgcctc
caagactgtccttccgtcagtaaaacaagggcaattgaaaacagaagcattgaaccaatt
ctaacagagactttgcacagacctattgacttacttccccgagagagtttgcgcagggct
attgaggtatatcctcaggagacttcgcacaaacacatagaggtggttcctcaggaccca
ttccgcagacctattgacgttatacctcaggaatcatttcatagacacattgaggctggt
tcacatgaggctttacctgatttgcatgtagatcatctttcacagcgtagttccatggta
cctagtatacccagtgactctaccagttatgccaccaaaattcatcctttgtctctgaag
cccgagaaggctcctcctttggatactagaacatttcagcaggaagtggttttcaaaatt
ctttgcttcagtgatagggttggttgtgttattggaaagggaggtgcaactattaaggcc
cttcaaagtgatactggagctaccgttaccattggagctgcaatcactgattgtgatgaa
cggttggttactgttactgcatcagagaatccagaatcacagtattctccagcacaaaag
gctgttgtccttgtttttgtaaaagtttttgaggcttctattgaaaagggtctagattca
ggcgcaggtaagggttcaaatgtcactgcccggctcgtagttccttcaacccaagttggc
tgtctgttgggaaaaggaggggccgtaatatctgaaatgcgcaaagcaacttctaccagc
atacggattttagggaaggaccaggtccctaagtgtgtcagtgaaaatgatcaagtggta
cagatttcaggagggtattcgaatgtaaaagatgctatatatcatgtgactggtacattg
agagataaccatttttctacctctatgagaactgtgggagcaaaaagcagttcctcagtt
ttaacagagaccagtccttatgaaagatttttggataattcccctcttgagttgcaagca
tcaagtggagtttctcacagtcttggttggcatacttctttggcaatgagtaatacggat
tcctttggactttcttatagcttagatcggcctcgttcaccaggattgtggacatcagag
atggctactggattgaatccaaggagcatcatagacagtggaagaggactgacttctttt
agaggtggattagaacttggcagtggaaacaaatctgctgttgtgacaaatacaactgta
gagattagagttcctgagaatgttattgactctgtttatggggagaatggtcgcaatcta
gctcgcttaagagagatctctggtgccaaggtcatagtgcatgaacctcaaataggaaca
agtgacaggattgttgttatatctgggacacctgatcaaacccaggccgctcagagcctc
ctacaagcattcatcctcactggtccaactcgctga
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