Gossypium raimondii: 105782460
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Entry
105782460 CDS
T04129
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105782460
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105782460
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105782460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-RING_16
Prok-RING_4
FANCL_C
RINGv
zf-C3HC4_3
Rad50_zn_hook
zf_RING_Vps8
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
105782460
NCBI-ProteinID:
XP_012462668
UniProt:
A0A0D2M964
LinkDB
All DBs
Position
1:11791459..11791932
Genome browser
AA seq
157 aa
AA seq
DB search
MFASSTVAFDHSILAIDKIEKCYSSLLSIVTVVQWSWNILLRFSLFPYQIPTPIGGDDFK
LGNRNHCSKRDVGDDDEEVECAICLCKIDEDDEIPELRCDHLFHKVCLDRWVGHRRTTCP
VCRRSLTPRQLASGMEVILFKYCSFDDTSHRETWWLR
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttcatcaacagtcgccttcgaccattcaatcctggcgattgacaagatagag
aagtgttactcttcccttctttcaatcgttacggttgtgcaatggtcatggaatatcttg
cttcgtttctccttgttcccttatcaaatccctacacccattgggggcgatgatttcaag
ctagggaaccggaatcactgcagcaagcgagacgtgggtgatgatgatgaagaagttgaa
tgtgctatatgtttatgtaagatcgatgaagacgatgagattccagagttgagatgtgac
catcttttccataaagtttgcttggatagatgggtcggacatcgacgtaccacatgccct
gtctgccgcagatctttaactcctcggcaactagcgtccggcatggaagttattcttttc
aaatattgttcttttgatgataccagccaccgggaaacctggtggctgcgttag
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