Gossypium raimondii: 105782494
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Entry
105782494 CDS
T04129
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105782494
03036 Chromosome and associated proteins [BR:
gra03036
]
105782494
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105782494
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105782494
SLIK complex
105782494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
105782494
NCBI-ProteinID:
XP_012462718
UniProt:
A0A0D2VIG7
LinkDB
All DBs
Position
13:complement(57440197..57453354)
Genome browser
AA seq
1773 aa
AA seq
DB search
MACFRNYSNDTVSHDALEGKSQGRNSGRILSSAENEDIDGTYSEREFDINMDAQYQSDGV
GISNSEQSRLHHEVATGNGAGISNSNFQPAGRRIAPGRWGSTFWKDCQPMDRQGGSDSGQ
ESKSDHKSLEGSVYNSSDDRDDRLESEVDEAQKEVGKSQRGHSDVPADEMLSDEYYEQDG
EEQSDTMHYSGFGNSVGLNTRAQSKHVSVSTNVSRSSKALNKRNYDNEDDNDDNNDDVDA
DYEEEEEEDEDDPDDVDFEPDYGLANSHAGNKDKDWDGEDSEEEDNSHGDLDVSDEDDSY
YKKKPKGRQQIKVGPNVKPTREHKSSNRQRRGRSSFEEDEYSAEDSDSESDGDFKSMARR
SGNNHKINARSNTLTSMGRNNEIRTSGRSVRKVSYVESEESEEIDEGKKKKTRKDEAEEE
DGDTIEKVLWHQPKGMAEDAIRNNRSTEPVLLSHFFDSEPDWSEMEFLIKWKGQSHLHCQ
WKSISELQNLSGFKKVLNYTKKVMEDVRYRKSLSREEIEVNDVSKEMDLDLIKQNSQVER
VIVDRIRKDAFGNVMSEYLVKWQGLSYAEATWEKDIDIPFAQDAIDEYKAREAAMAVQGK
MVDHQRKKGKASLRKLDEQPEWLRGGQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKT
VQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQ
YEFYNDKKIGRPIKFSALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS
EFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHM
ELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL
LNIVVELKKCCNHPFLFESADHGYGGDTGMNDISKMERIILSSGKLVILDKLLMRLHETK
HRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLST
RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE
RAKKKMVLDHLVIQKLNAEGRLERKETKKGAYFDKNELSAILRFGAEELFKEDKNDEESK
KRLLSMDIDEILERAEKVEEKVSEEEGNELLSAFKVANFCSAEDDGSFWSRWIKPDAIAQ
AEDALAPRAARNTKSYAETSQPERSNKRKKKGSDLQEQQERVPKRRKSEYSAPSAPMIEG
ATAQVRGWSYGNLPKRDALRFSRAVMKFGNESQITLIAEEVGGAVAAAPLDAQIELFNAL
VEGCREAVEVGNIEPKGPLLDFFGVPVKANDLVNRVQELQLLAKRISRYEDPIKQFRVLM
YLKPSNWSKGCGWNQIDDARLLLGIYYHGFGNWEKIRLDERLGLTKKIAPAELQHHETFL
PRAPNLKERANALLEMELAAVGGKNAGVKAGRKPSKKEKQNPLNVSISRVRDKKGKPGST
KVSFKMGRDKTERPQKVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCEDVMIDEIKTLRRL
QRLQTTSADLPKDKVLSKIRNYLQLLGRRIDQIVLEHEDEPYRQDRMTMRLWNYVSTFSN
LSGERLHQIYSKLKQEQDDDGVGPSHMNGSTPGHVDRDGDPNFFPPFSRSTDKQRGHKKN
ATAHQTSQPNHKGIDTAKFEAWKRWRAETVNHPQLQPPTQRPLNNGSTRVVDPNSLGILG
AGPSDKRLVNTERPFRMRQTGFPQRQGFPSGIK
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttttagaaactattcaaatgacacagtctcacatgatgccttggaaggcaaa
agccagggacgaaacagtggtaggattctgagctcagcagagaacgaggacatagatggt
acttatagtgaaagagaatttgatattaacatggatgcacagtatcaaagtgatggggtt
ggcatttcaaattcagagcagagtaggctgcatcatgaggtggctactggtaatggtgct
ggcatttcgaattccaattttcagccagcaggaaggagaatagcacctgggagatggggt
tcaactttttggaaggactgccagcctatggatcgccagggtggatccgattctgggcag
gagtcaaaatctgaccataagagtttggaaggctcagtatataattcatcagatgacagg
gatgataggttagaatcagaagttgacgaggcacaaaaagaagttggcaagtctcaaagg
ggtcattctgatgtccctgcagatgagatgttatctgatgaatactatgaacaggatggg
gaagagcagagtgatacaatgcattacagtggctttggcaattctgtcgggttaaatact
agggcacagtcaaagcatgtttctgtcagtaccaatgtgtccaggagttcaaaagcattg
aataagcgtaactatgacaatgaagatgataatgatgacaacaatgatgatgtagatgca
gattatgaagaggaggaagaagaagatgaagatgaccctgatgatgtcgattttgagcct
gactatggtcttgccaattctcatgcagggaataaggataaagactgggatggtgaagat
tctgaggaagaagacaatagtcatggtgatttagatgtttcagatgaagatgattcttat
tataaaaagaaacctaaaggtaggcaacaaattaaagttggacctaatgtaaaacccact
agagaacataagtcctccaatcgacaaagaagagggagatcatcttttgaggaggatgaa
tactcagccgaggattctgatagtgaaagcgatggggatttcaagagtatggcaaggaga
agtggaaataatcataaaattaatgctcgttctaatacattgacaagcatgggaagaaac
aatgagattcgtacttctggtaggtctgttcggaaagtatcatatgttgagagtgaagaa
agtgaagaaattgatgaaggcaagaagaaaaagacacgaaaggatgaagctgaagaggaa
gatggtgacacaattgaaaaagtgttatggcatcaaccaaagggcatggctgaagatgct
attagaaacaatagatctacagagcctgttttattaagccacttctttgactctgaacca
gattggagcgaaatggaattcctgataaaatggaaaggccagtcacatcttcattgtcag
tggaaatctatttctgagctgcaaaatcttagtggttttaagaaggttctaaattacact
aaaaaggtgatggaggatgtgagatacaggaagtcactttcacgtgaggagattgaagtc
aatgatgtgagtaaggaaatggacttggatctaatcaagcaaaatagtcaggtggagaga
gtaattgttgatcgaatcaggaaagatgcctttgggaatgtgatgtcagagtatttagtc
aagtggcagggattgtcttatgcagaagcaacctgggaaaaggatattgatattccattt
gctcaagatgctattgatgagtataaggctcgtgaagctgcaatggctgtgcaggggaaa
atggtagatcaccagcgtaagaagggaaaagcaagtttgcggaaacttgatgaacagcca
gaatggttaaggggaggacagcttcgtgattatcagctggagggtttgaattttcttgtc
aacagttggagaaatgatactaatgtcatcttagctgatgagatgggtcttggtaaaact
gttcagtctgtatctatgcttggttttctacagaatgcccaacaaatacccggcccgttt
cttgtggtcgtaccattatccacactgtcaaactgggctaaagaatttagaaagtggctt
cctgatatgaacattattgtatatgttggtactcgtgccagccgagaggtatgtcagcaa
tatgaattttacaatgacaagaaaattggcagacctataaaatttagtgccctgctgact
acttatgaagtagttctgaaggataaagcagtactgtctaagataaaatggaactatttg
atggttgatgaagctcataggttgaagaatagcgaggcgcagttgtacacaactctttca
gaatttagcaccaagaacaagttgcttattactggaactccattacaaaacagtgttgag
gagctatgggctctgcttcatttccttgatcctgacaagttcaaaaataaggatgatttt
gttcaaaattacaagaatcttagttcgtttaatgaaattgagcttgctaatcttcacatg
gaattgaggcctcacattcttcgaagggttatcaaagatgtagagaagtctttgcctcca
aaaattgagcgtatccttagggttgagatgtccccacttcagaaacagtattataagtgg
attttggaacgcaacttccatgacttaaataaaggtgttcgtggcaatcaggtctcactt
ttaaatatagtagtcgagctgaagaaatgctgcaatcatcccttcctgtttgaaagtgct
gatcatggttatggtggggacactggcatgaatgatattagtaaaatggagagaattata
ttaagcagtgggaagcttgttatacttgacaagttgcttatgaggttgcatgaaacaaag
catcgtgttttaatcttttcccagatggttagaatgctggatatattagccgagtacatg
tcactcagaggattccaattccagaggcttgatggtagtacaaaggcggagttgcgacag
caggctatggatcatttcaatgcacctggaagtgatgatttttgcttccttctttctact
cgggctggtgggctcggtatcaacctggcaactgcagacactgtcataatatttgattct
gactggaacccccagaatgacttacaggcaatgagtagagctcacagaattgggcaacaa
gaagttgtcaacatttacagatttgtgacaagcaaaagtgttgaggaagacatcctggag
cgagctaagaagaagatggtgcttgaccatttggtgatccaaaagttaaatgcagagggt
agactggaaagaaaggaaacaaagaaaggggcttattttgacaagaatgaattatcagca
attttgagatttggagctgaagaattgttcaaagaggataaaaatgatgaagaaagcaaa
aaaaggctgttaagtatggatatcgatgaaattcttgaaagagccgaaaaggttgaggag
aaagtcagtgaagaggaagggaatgaattattgagtgcttttaaggttgcaaatttttgt
agtgctgaagatgatgggtctttctggagtcgttggataaaaccagatgccattgcccaa
gcagaagatgctctagctcctcgtgctgcaagaaataccaagagttatgctgagacaagt
caacctgagagaagtaacaaaagaaagaagaagggatctgatcttcaagagcagcaggag
agagttccaaagcgccgtaaatcagaatactctgccccctcggcaccaatgattgaggga
gcaactgctcaagtgagaggatggtcttatgggaatctgcctaagagagatgcattgcgt
ttttctcgagcggttatgaaattcgggaatgagagccaaatcaccttgatagcagaggaa
gttggtggtgctgttgcagcagctccacttgatgcgcagattgagctcttcaatgcccta
gttgaaggatgcagggaagctgttgaagtaggaaatatagaacctaagggaccattatta
gatttctttggtgttcctgttaaggcaaatgatctggttaatcgtgtccaagaacttcag
ctcttagcaaaacgaataagtcgttacgaggatcccataaaacagttccgtgtgttgatg
taccttaaaccctctaattggtctaaagggtgtgggtggaatcagattgatgatgcaaga
ttgcttctgggaatatactaccatggatttggtaattgggaaaagataagattagatgaa
aggcttggcctcacaaagaagattgctcctgctgaacttcagcaccatgaaacctttctg
ccacgtgcacctaatttgaaggagcgtgctaatgcactcttggaaatggaacttgcagct
gttggtggtaagaatgctggtgtcaaagctggtcgtaaaccttcgaagaaggaaaagcag
aatcctctaaacgtatcgatatctcgtgtcagagacaagaaaggtaaaccgggttctact
aaggtcagttttaaaatgggtagggacaaaaccgagagacctcagaaagttgaaccttta
gttaaagaagaaggtgaaatgtctgacaacgaggaagtatatgagcagtttaaggaagtg
aagtggatggaatggtgtgaagatgttatgattgacgaaataaaaacccttcgtcggctc
caaagattgcagactactagtgcagatcttcccaaggataaggtactttcgaaaattcgg
aactatttgcagcttcttggaaggaggatagatcaaattgtcttagaacatgaagacgag
ccctatagacaagatcggatgaccatgcgtttatggaactatgtctctacattttcaaat
ctttctggtgagaggcttcatcagatttattcgaagcttaagcaggaacaggacgatgat
ggtgttggaccttcccatatgaatggttccacacctggccatgttgatagagacggtgat
cctaatttcttccctcctttttcacgttctaccgataagcaacgagggcataagaagaat
gcaacggcacatcaaacatcacaaccgaatcataaaggcatcgataccgcaaagtttgaa
gcttggaaacgatggagagcagaaacggttaaccatcctcaacttcaacccccaactcaa
agacctctgaacaatggtagtactcgtgtagtagacccaaactcattggggattctcggg
gcaggaccatctgataaacgtcttgttaataccgaacggccatttcggatgcgtcaaact
ggatttccacaaaggcaaggttttccctcaggcatcaagtaa
DBGET
integrated database retrieval system
