Gossypium raimondii: 105782511
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Entry
105782511 CDS
T04129
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105782511
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105782511
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105782511
03036 Chromosome and associated proteins [BR:
gra03036
]
105782511
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105782511
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105782511
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105782511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
105782511
NCBI-ProteinID:
XP_012462746
UniProt:
A0A0D2SGH2
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All DBs
Position
13:49931801..49938480
Genome browser
AA seq
539 aa
AA seq
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MEAVVVGDIASLDAELLHLQEMSPLALKSYPEFTQKLFEQWLSLPEANKLVTSLVNDAKA
GNPLNVPANTSGGGSPSSNSLPSMFPAGSAPPLSPRSTSGSPRITKQRAGLSNLGSPLKV
VSEPVKEFIPQFYFKNGHPPPNDLKEQYMSRISQFFAGHPEGLQLQEFKLVTKEVCKLPS
FFSPSLFKKIDVNSTGLVTRDAFVDYWVNGNLLTKDVATQIYTVLKQPYLKYLVQDDFKP
LLQELLATHPGLEFLQSTPEFQERYAETVIYRIYYYINRSGTGHLTLRELKRGNLIDAML
HCDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGVLTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQMIDMIKPQDESYIMLRDLKGSKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEDDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagttgttgttggagatatagcgtctttggatgcggagctattgcatctccag
gagatgtctcctttagctctcaaatcctatcctgaattcactcaaaagcttttcgaacag
tggctttcgcttcctgaagctaacaagctggtaacatcattggttaatgatgcaaaggcg
ggtaatcccttgaatgttcctgcaaacacttccggtggaggctctccctcaagcaattcg
ttaccttccatgtttcctgctggcagtgctcctcccctttcaccaagaagtacatctggt
tcgcctcgtataacaaaacaaagggctggtctttcaaacttgggttctcccctgaaagta
gttagcgagcctgtgaaagagtttatacctcagttttacttcaaaaatggccatccacct
ccaaatgatctaaaagaacaatatatgtctcggatcagtcagttctttgctggccacccg
gagggactacaactgcaagaattcaaactagtgaccaaggaagtatgcaaactgccttca
tttttctccccatcacttttcaaaaaaattgatgttaatagcactggtttggtcacaaga
gatgcatttgttgattattgggtcaatggaaacttgttgacgaaggatgtagcaactcaa
atttatacagtactaaaacaaccatatctcaagtaccttgttcaggatgacttcaaacct
ttactccaagaactattggcaactcatcctgggttggagttcttacagagtacacctgag
tttcaggaaagatatgctgaaactgttatatacagaatatattactacataaatagatct
gggactggtcacctcactcttagagaattgaaacgtgggaacttgattgatgccatgcta
cattgtgatgaggaagaggacattaataaagttttgaggtacttttcatatgaacatttt
tatgtaatatactgcaagttttgggagctggatacagatcatgatttcttgattgacaag
gagaaccttatcagatatggtaaccatgcgcttacctacagaattgtcgatagaatattt
tctcaggtcccaagaaagtttaccagtaaggttgaaggaaagatgggttatgaagatttt
gtttacttcatccttgcagaggaggacaagtcatctgagcctagtcttgagtattggttc
aagtgcatagatttggatggcaatggagttctaactcgtaatgaaatgcaattcttttat
gaggagcagttgcaccgaatggaatgcatggcacaggagcctgtgctctttgaggacatc
ttgtgtcagatgattgacatgattaaaccgcaggatgagagttatatcatgttgcgtgac
ctgaaaggttctaaactatctggaagtgttttcaatatccttttcaatcttaacaaattc
atggcttttgaaactcgcgatccattcctcattcgtcaggagcgtgagaatcctacattg
acagaatgggaccgttttgcacatcgagaatatattaggctttcaatggaagatgatgtt
gaagatgcctccaatggaagtgctgaagtttgggatgaatcacttgaggctcccttctaa
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