Gossypium raimondii: 105782549
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Entry
105782549 CDS
T04129
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome
gra04144
Endocytosis
gra05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105782549
04142 Lysosome
105782549
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105782549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105782549
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105782549
Membrane trafficking [BR:
gra04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
105782549
Exosome [BR:
gra04147
]
Exosomal proteins
Proteins found in most exosomes
105782549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
105782549
NCBI-ProteinID:
XP_012462805
UniProt:
A0A0D2TT68
LinkDB
All DBs
Position
13:complement(1218934..1231011)
Genome browser
AA seq
1698 aa
AA seq
DB search
MAAANAPIAMKEVLTLPSIGINPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSVPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKTFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYAPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDTHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEGADVYPDLVRYLLMVRQKVKEPKVDGELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNHYRDAMETASQSGE
RELAEELLVYFIEQGKKECFASCLFVCYDLVRPDVALELAWINNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQKEVKAKEQEEKDVIAQQNMYAQLLPLALPAPPVPGMGGFAPPPMG
GMGMPPMPAFGMPPMGSY
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaacgctcctattgccatgaaggaggtcttaactttgccaagcattggc
attaatccgcagttcattacattcacgaacgtaactatggaatctgataagtatatttgt
gtgagagaaactgcaccgcaaaatagtgttgtgatcatcgacatgagcatgccgatgcag
ccgttgagacggcctattacagcggactctgctcttatgaatccaaattctagaatcctg
gctctgaaagctcaactgccgggaacaactcaagatcatttgcaaatatttaacatagag
atgaaagcaaaaatgaagtcacatcagatgcctgaacaggttgtattttggaaatggatt
tccccaaaaatgcttggcctagtcacacaaacttctgtgtatcattggtcaattgaaggc
gactccgtaccagttaaaatgtttgagagaacagcaaatttagtgaacaatcagataata
aactataaatgtgatccttctgagaagtggttggttttgattggaattgcccctggtgca
cctgagaggccgcaattggttaaggggaacatgcaacttttctccgttgatcagcaacgt
agtcaagctcttgaagcacatgctgcttcatttgcacaatttaaggttccaggaaatgag
aatccttctattctaatttcctttgccacgaagacttttaatgctggtcagattacatca
aaattgcatgtaattgagcttggtgcgcagccaggtaagccatcgttttcaaagaaacag
gcagatctattctttccaccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatatagtttgatctatgttatcaccaagctaggactgcttttcgtttatgatcta
gagactgcaagtgctgtatacagaaatagaatcagtccagatccaatatttttaacctct
gaagctacatcagcgggagggttttatgccatcaacaggcgagggcaggtgttgctggct
actgtaaatgaagcaacaatagtgccatttgttagcggtcaattgaacaatttggagctt
gctgtcaatctagctaaaagaggaaaccttcctggtgcagagaacctggttgttcaacgt
tttcaagaattgtttgctcaaacgaagtataaagaagctgctgagcttgctgcagagtct
ccacaagggatccttcgtacacctgatacagttgccaagtttcagagtgttcccgtgcaa
gctgggcagactccaccgctgttgcagtactttggtacgcttttaactagagggaagctc
aatgcattcgagtcattggaattatctcggcttgtggtaaaccaaaacaagaaaaatctt
ctggaaaattggttggctgaagataagttggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgctctaaaaatatatattaaagctagggcaactccaaaa
gttgttgcagcttttgcagaacggagggagtttgacaaaatcttgatttactcgaagcag
gttgggtacgctcctgattacttattccttctgcaaacaattcttcgtacagatccacag
ggagctgtaaattttgcattgatgatgtctcaaatggagggaggttgcccagttgattac
aacaccattactgatctttttcttcagaggaacttgatacgggaggctacagcatttcta
ttggacgttttgaagcctaatctgcctgagcacgcttttctacaaactaaggtcttggaa
atcaatctagttacttttccaaatgttgctgatgccattttagcaaatggcatgttcagt
cactatgaccgtcctcgtattgcacaactctgtgagaaagctggtctctatgtccgagct
ctgcagcattacactgagttaccagatattaaacgtgtcattgtgaatacacatgctatt
gagccacagtcacttgttgagttttttggtactctttcacgagaatgggctttggagtgc
atgaaggatcttttgctggttaatctaaggggcaacctccaaataattgttcaggttgcc
aaggagtattgtgagcagctgggtgttgatgcttgcataaagctttttgagcagtttaag
tcttatgaaggattgtacttctttctgggctcttatttgagctcaagtgaggaccctgat
atacactttaagtacatcgaggcagctgctaaaactggacaaataaaggaggttgagcgt
gtgaccagggaatccaacttttacgatgctgagaagacaaagaacttcctgatggaggcc
aagcttcctgatgccaggcccttgattaatgtttgtgatcggtttgggtttgttcctgat
ctcactcactatctctacacaaataacatgttacgttacattgaaggttacgttcagaag
gtgaacccagggaatgctcctttagtggtggggcagttgctagatgatgaatgccctgaa
gattttatcaagggtctcattctctcagtccgttctttgcttccagttgagccccttgtg
gaggaatgtgagaagagaaatcgtcttcgtttacttacacagttcttggagcatcttgta
agtgagggaagccaagatacacatgtccacaatgctttgggtaaaatcatcattgacagc
aataacaatccagagcatttcctcacaaccaacccttactatgactcccgggttgttggc
aagtactgtgagaagcgtgatcccaccctagcagttgtggcttaccgaagaggacaatgt
gatgatgaacttatcaatgtcacaaataaaaactcattgttcaaattgcaagccaggtat
gttgttgagaggatggatggcgatctttgggagaaggtgctaaatcctgaaaatgaatac
agaagacagctaattgatcaggttgtgtcgacagctttgccagaaagcaagagtccagaa
caagtctctgctgctgttaaagctttcatgactgctgacctgccccatgaactgattgaa
cttcttgagaagattgttctccaaaactctgcattcagtgggaacttcaatctgcaaaat
cttcttattctgacagctattaaggcagatccatctagagttatggattatatcaatagg
ctagataattttgatggacctgcagttggagaagtggccgtcgaagctcaactgtatgaa
gaagcatttgcaattttcaaaaagttcaaccttaatgttcaggctgtaaatgttttattg
gataacataagaagcatcgatcgggctgtggaatttgcattccgagttgaagaagatgct
gtttggagtcaggtggcaaaggcacaactgagggaggggctagtaagcgatgcaattgaa
tcgtttattcgtgcagatgatgctactcagttccttgatgtaatccgagcatctgagggt
gctgatgtgtaccctgatttggtgaggtaccttctgatggttagacagaaggtcaaggag
cccaaggtggatggtgaactcatttatgcatatgcaaagattgatagactgggtgaaatt
gaagaattcattctcatgccaaatgttgctaatcttcaaaatgttggtgatcgtttgttt
gatgaagccttgtatgaagctgctaaaataatatttgcatttatatcaaactgggccaag
ttggctgttacactggtgaggcttaaacaattccagggtgctgttgatgcagcccgaaaa
gcaaatagtgccaagacatggaaggaggtttgctttgcttgtgttgatgcagaggaattc
cgattggcacagatatgtggtcttaacattattatacaggtggatgacttggaagaagtt
agtgaatactatcaaaataggggatgtttcaatgagttgatctctctcatggagagtggt
ttaggattggaacgtgcacacatggggatctttactgagttgggagttctttatgccaga
tatcgttatgagaagcttatggagcacattaaattgttctctactcgtctcaatatcccc
aagctgataagagcctgtgatgagcagcagcattggaaggaacttacgtacttgtatatc
cagtacgatgagtttgataatgctgctactactgtgatgaaccactctcctgaagcatgg
gatcacatgcaatttaaagatattatagtcaaagttgcaagtgttgagctttattacaag
gctgtccacttctacttgcaagaacatcctgatctcatcaatgatatgcttaacgtgctt
gcactacgagtggatcacacccgtgtcgttgacattatgagaaaggctggtcatctgcgt
cttgtgaagccatacatggttgctgttcagagcaacaacgtgtcagcagtaaatgaggca
ttgaatgagatttatgtggaggaagaagattatgatagattgagagaatctattgacttg
cacgataactttgatcagattggccttgcacaaaagattgagaaacatgagctgcttgaa
atgaggcgcgttgctgcatacatttacaaaaaggcaggtagatggaagcagtcaattgcc
ttgtcaaagaaggacaaccattacagagatgcaatggaaacagcttcacagtctggtgaa
cgtgaacttgccgaggagttgcttgtttacttcattgagcagggcaagaaagaatgcttc
gcatcgtgcctctttgtctgttatgacttagttcgaccagatgttgcccttgagctagcc
tggataaacaatatgattgactttgcattcccgtatctattacagtttatccgtgaatac
actggcaaagttgatgaacttatcaaggacaagattgaggctcaaaaggaagtaaaggct
aaagagcaggaagagaaggatgtgatcgcacaacagaacatgtatgcacagttgctacct
cttgccttgcccgcaccgccagtgccaggcatgggaggttttgctccaccacccatggga
ggaatgggaatgcctccaatgccagctttcggcatgccaccaatgggcagctattaa
DBGET
integrated database retrieval system