KEGG   Gossypium raimondii: 105782549
Entry
105782549         CDS       T04129                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
gra  Gossypium raimondii
Pathway
gra04142  Lysosome
gra04144  Endocytosis
gra05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:gra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105782549
   04142 Lysosome
    105782549
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    105782549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gra04131]
    105782549
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gra04147]
    105782549
Membrane trafficking [BR:gra04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    105782549
Exosome [BR:gra04147]
 Exosomal proteins
  Proteins found in most exosomes
   105782549
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 105782549
NCBI-ProteinID: XP_012462805
UniProt: A0A0D2TT68
LinkDB
Position
13:complement(1218934..1231011)
AA seq 1698 aa
MAAANAPIAMKEVLTLPSIGINPQFITFTNVTMESDKYICVRETAPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSVPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKTFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYAPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDTHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEGADVYPDLVRYLLMVRQKVKEPKVDGELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNHYRDAMETASQSGE
RELAEELLVYFIEQGKKECFASCLFVCYDLVRPDVALELAWINNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQKEVKAKEQEEKDVIAQQNMYAQLLPLALPAPPVPGMGGFAPPPMG
GMGMPPMPAFGMPPMGSY
NT seq 5097 nt   +upstreamnt  +downstreamnt
atggcggctgcgaacgctcctattgccatgaaggaggtcttaactttgccaagcattggc
attaatccgcagttcattacattcacgaacgtaactatggaatctgataagtatatttgt
gtgagagaaactgcaccgcaaaatagtgttgtgatcatcgacatgagcatgccgatgcag
ccgttgagacggcctattacagcggactctgctcttatgaatccaaattctagaatcctg
gctctgaaagctcaactgccgggaacaactcaagatcatttgcaaatatttaacatagag
atgaaagcaaaaatgaagtcacatcagatgcctgaacaggttgtattttggaaatggatt
tccccaaaaatgcttggcctagtcacacaaacttctgtgtatcattggtcaattgaaggc
gactccgtaccagttaaaatgtttgagagaacagcaaatttagtgaacaatcagataata
aactataaatgtgatccttctgagaagtggttggttttgattggaattgcccctggtgca
cctgagaggccgcaattggttaaggggaacatgcaacttttctccgttgatcagcaacgt
agtcaagctcttgaagcacatgctgcttcatttgcacaatttaaggttccaggaaatgag
aatccttctattctaatttcctttgccacgaagacttttaatgctggtcagattacatca
aaattgcatgtaattgagcttggtgcgcagccaggtaagccatcgttttcaaagaaacag
gcagatctattctttccaccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatatagtttgatctatgttatcaccaagctaggactgcttttcgtttatgatcta
gagactgcaagtgctgtatacagaaatagaatcagtccagatccaatatttttaacctct
gaagctacatcagcgggagggttttatgccatcaacaggcgagggcaggtgttgctggct
actgtaaatgaagcaacaatagtgccatttgttagcggtcaattgaacaatttggagctt
gctgtcaatctagctaaaagaggaaaccttcctggtgcagagaacctggttgttcaacgt
tttcaagaattgtttgctcaaacgaagtataaagaagctgctgagcttgctgcagagtct
ccacaagggatccttcgtacacctgatacagttgccaagtttcagagtgttcccgtgcaa
gctgggcagactccaccgctgttgcagtactttggtacgcttttaactagagggaagctc
aatgcattcgagtcattggaattatctcggcttgtggtaaaccaaaacaagaaaaatctt
ctggaaaattggttggctgaagataagttggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgctctaaaaatatatattaaagctagggcaactccaaaa
gttgttgcagcttttgcagaacggagggagtttgacaaaatcttgatttactcgaagcag
gttgggtacgctcctgattacttattccttctgcaaacaattcttcgtacagatccacag
ggagctgtaaattttgcattgatgatgtctcaaatggagggaggttgcccagttgattac
aacaccattactgatctttttcttcagaggaacttgatacgggaggctacagcatttcta
ttggacgttttgaagcctaatctgcctgagcacgcttttctacaaactaaggtcttggaa
atcaatctagttacttttccaaatgttgctgatgccattttagcaaatggcatgttcagt
cactatgaccgtcctcgtattgcacaactctgtgagaaagctggtctctatgtccgagct
ctgcagcattacactgagttaccagatattaaacgtgtcattgtgaatacacatgctatt
gagccacagtcacttgttgagttttttggtactctttcacgagaatgggctttggagtgc
atgaaggatcttttgctggttaatctaaggggcaacctccaaataattgttcaggttgcc
aaggagtattgtgagcagctgggtgttgatgcttgcataaagctttttgagcagtttaag
tcttatgaaggattgtacttctttctgggctcttatttgagctcaagtgaggaccctgat
atacactttaagtacatcgaggcagctgctaaaactggacaaataaaggaggttgagcgt
gtgaccagggaatccaacttttacgatgctgagaagacaaagaacttcctgatggaggcc
aagcttcctgatgccaggcccttgattaatgtttgtgatcggtttgggtttgttcctgat
ctcactcactatctctacacaaataacatgttacgttacattgaaggttacgttcagaag
gtgaacccagggaatgctcctttagtggtggggcagttgctagatgatgaatgccctgaa
gattttatcaagggtctcattctctcagtccgttctttgcttccagttgagccccttgtg
gaggaatgtgagaagagaaatcgtcttcgtttacttacacagttcttggagcatcttgta
agtgagggaagccaagatacacatgtccacaatgctttgggtaaaatcatcattgacagc
aataacaatccagagcatttcctcacaaccaacccttactatgactcccgggttgttggc
aagtactgtgagaagcgtgatcccaccctagcagttgtggcttaccgaagaggacaatgt
gatgatgaacttatcaatgtcacaaataaaaactcattgttcaaattgcaagccaggtat
gttgttgagaggatggatggcgatctttgggagaaggtgctaaatcctgaaaatgaatac
agaagacagctaattgatcaggttgtgtcgacagctttgccagaaagcaagagtccagaa
caagtctctgctgctgttaaagctttcatgactgctgacctgccccatgaactgattgaa
cttcttgagaagattgttctccaaaactctgcattcagtgggaacttcaatctgcaaaat
cttcttattctgacagctattaaggcagatccatctagagttatggattatatcaatagg
ctagataattttgatggacctgcagttggagaagtggccgtcgaagctcaactgtatgaa
gaagcatttgcaattttcaaaaagttcaaccttaatgttcaggctgtaaatgttttattg
gataacataagaagcatcgatcgggctgtggaatttgcattccgagttgaagaagatgct
gtttggagtcaggtggcaaaggcacaactgagggaggggctagtaagcgatgcaattgaa
tcgtttattcgtgcagatgatgctactcagttccttgatgtaatccgagcatctgagggt
gctgatgtgtaccctgatttggtgaggtaccttctgatggttagacagaaggtcaaggag
cccaaggtggatggtgaactcatttatgcatatgcaaagattgatagactgggtgaaatt
gaagaattcattctcatgccaaatgttgctaatcttcaaaatgttggtgatcgtttgttt
gatgaagccttgtatgaagctgctaaaataatatttgcatttatatcaaactgggccaag
ttggctgttacactggtgaggcttaaacaattccagggtgctgttgatgcagcccgaaaa
gcaaatagtgccaagacatggaaggaggtttgctttgcttgtgttgatgcagaggaattc
cgattggcacagatatgtggtcttaacattattatacaggtggatgacttggaagaagtt
agtgaatactatcaaaataggggatgtttcaatgagttgatctctctcatggagagtggt
ttaggattggaacgtgcacacatggggatctttactgagttgggagttctttatgccaga
tatcgttatgagaagcttatggagcacattaaattgttctctactcgtctcaatatcccc
aagctgataagagcctgtgatgagcagcagcattggaaggaacttacgtacttgtatatc
cagtacgatgagtttgataatgctgctactactgtgatgaaccactctcctgaagcatgg
gatcacatgcaatttaaagatattatagtcaaagttgcaagtgttgagctttattacaag
gctgtccacttctacttgcaagaacatcctgatctcatcaatgatatgcttaacgtgctt
gcactacgagtggatcacacccgtgtcgttgacattatgagaaaggctggtcatctgcgt
cttgtgaagccatacatggttgctgttcagagcaacaacgtgtcagcagtaaatgaggca
ttgaatgagatttatgtggaggaagaagattatgatagattgagagaatctattgacttg
cacgataactttgatcagattggccttgcacaaaagattgagaaacatgagctgcttgaa
atgaggcgcgttgctgcatacatttacaaaaaggcaggtagatggaagcagtcaattgcc
ttgtcaaagaaggacaaccattacagagatgcaatggaaacagcttcacagtctggtgaa
cgtgaacttgccgaggagttgcttgtttacttcattgagcagggcaagaaagaatgcttc
gcatcgtgcctctttgtctgttatgacttagttcgaccagatgttgcccttgagctagcc
tggataaacaatatgattgactttgcattcccgtatctattacagtttatccgtgaatac
actggcaaagttgatgaacttatcaaggacaagattgaggctcaaaaggaagtaaaggct
aaagagcaggaagagaaggatgtgatcgcacaacagaacatgtatgcacagttgctacct
cttgccttgcccgcaccgccagtgccaggcatgggaggttttgctccaccacccatggga
ggaatgggaatgcctccaatgccagctttcggcatgccaccaatgggcagctattaa

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