Gossypium raimondii: 105782550
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Entry
105782550 CDS
T04129
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105782550
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105782550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
CLASP_N
RIX1
Motif
Other DBs
NCBI-GeneID:
105782550
NCBI-ProteinID:
XP_012462806
UniProt:
A0A0D2U446
LinkDB
All DBs
Position
13:51529661..51549363
Genome browser
AA seq
2054 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSSYLHSKNWE
TRVAAAHAIGAIAQNVKHTSLADLFSSVGAKMTGAGISANVKDVVVSPELHSKIVSGVSF
RSFDINKVLEFGALLASGGQEYDIANDNLKNPKERLARQKQNLKRRLGLDMCEQFMDVGD
MIRDEDLVVHKYHQGNGLDNRFYTPPSVNNIQQFVSRMVPNVISKRRPSARELNMLKRKA
KINSKDQAKGWSDDGDTDLSPAHNVSTPRGACPDPLGSSKFDAVTDEDSSDHDGDGRWPF
RSFVEQLILDMFDPVWEIRHGSVMALREILTHHGGSAGVYLPDLNSDDALFLEVKDIEYP
IKIKREREIDLNMQVSPDELEPNLKKPKIEDEPFLVLDKVSSAGQHGGFDVAIKIEDSGW
TFPSGQFNGQHDISSMKMESEFYDNDVMYQSKEAVVVEEPKSYYEDKGAFANSDVLKDLP
ENCELINFVKLARHSWLKNCEFLQDCAVRFLCVLSLDRFGDYVSDQVVAPVRETCAQALG
ATFKYMHPSLVHETLNVLLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYVLPACK
AGLEDPDDDVRAVAADALIPAADAIVALKGQSLHSIVMLLWDILLDLDDLSPSTSSVMNL
LAEIYSQEDMMPKMFGTPTAKEKQNFDLNEVVDVEEVGEAKDLQENPYMLSMLAPRLWPF
MRHSITSVRHSAIRTLERLLQAGYKRSISEPSGSSFWPSFILGDTLRIVFQNLLLESNEE
ILQCSERVWRLLVQCPVGDLEVAAASFMSSWIELATTSYGSTLDATKMFWPVALPRKSHH
KAAAKMKAVKLENESYGTTGLDSVRGAVSQENNGDTSSNLVKIIVGADAEMSVTNTRVIT
ASALGIFASKLQANSLQCVVDPLWNALTSLSGVQRQVASVVLISWFKEIKSRDSSGNQEI
IHSFPDHLRKWLLDLLACSDPAFPTKDSVLPYAELSRTFAKMRNEASQLLHAVESSGMFV
DILSTMKVNVESVTVDEAISFASKLLLLSNDNAENESMKRNIDDIESAKQRLIATSGYLK
CVQSNLHVTVTSLVAAAVVWMSELPARLNPIILPLMASIKREQEEILQQKAAEALAELIY
HCIARKPSPNDKLIKNICSLACSDPSETPQAAVINSMEIIDDQDFLSFGTSTGKPKSKVH
MLAGAEDRSKVEGFISRRGSELALRHLCEKFGPTLFEKLPKVWDCITEVLLPSSPSEDHQ
IVQAVESVKDPQILINNIQVVRSIAPVLDESLKPKLLMLLPCIFKCVSHSHVAVRLAASR
CIMTMAKSMTVNVMRAVIENAIPMLGDVTSVHARQGAGMLITLLVQGLSVELVPYAPLLV
VPLLRCMSDCDHSVRQSVTRSFAALVPLLPLARGLPPPVGLSEGLSRNAEDAKFLEQLLD
NSHIDDYKLFTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASEI
AEYRASNKDVDPPPSLIVCPSTLVGHWAFEIEKYIDASLISTLQYVGSVQDRVALREQFD
KHNVVITSYDVVRKDAEYLAQFPWNYCILDEGHIIKSAKSKITLAVKQLKAQHRLILSGT
PIQNNIMDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPKCSAKDAEAGALAMEALHK
QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPAQLLLYEQFSGSHVKQEISSMVKTDESG
VAGGAKQTSPKASTHVFQALQYLLKLCSHPLLVVGDKVPESLTSQLSELFPANSDVISEL
RKLHHSPKLVALQEILEECGIGVDTSASDGAVTVGQHRVLIFAQHKALLDIIEKDLFHTH
MKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLIFMEHDW
NPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINAENASLKT
MNTDQLLDLFASAETSKKGATASKRSDSGIDGDPKLMGTGKGLKAILGGLEELWDQSQYT
EEYNLSQFLAKLNG
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaacaatcctcgcgtctcaatcgtttactcactctgttggacactggttca
acgcaagcgacgagattcactgcagcgcggcagattggtgatatcgccaaatcgcatccg
caggatttgagttctcttctcaagaaggtttcttcgtatcttcacagtaaaaattgggaa
acgagggttgctgctgctcatgccataggggctattgctcaaaatgttaagcacacttct
ctggctgatttattctcttctgttggagcaaagatgactggggctgggatatctgctaat
gtcaaagatgtggtggtatcacctgagttacattctaaaattgtatcaggtgtttcattt
agaagctttgacatcaacaaggtgttggagtttggtgcgttattggcctcaggtggacag
gagtatgatattgcgaatgataacttaaagaatcctaaagagagattggctcgccagaaa
cagaatctaaaaagacgtctaggtttggatatgtgtgagcagttcatggatgtcggtgat
atgattagagatgaggaccttgtagttcacaaataccaccaaggaaatgggttagataat
agattttacacgccaccatctgtaaataacatccagcaatttgtttcacgtatggtacct
aatgttatttctaaaagaaggccaagtgctagggagttgaatatgttaaagcgaaaagct
aaaataaattcgaaagatcaagcaaaaggctggtctgatgatggagatacagatttatca
cctgctcataatgtatcaactccaagaggagcatgtcctgatccattaggttcgagtaag
tttgatgctgttactgatgaagacagctctgatcatgatggggatggccgttggcctttc
cgtagttttgtcgagcaactcattcttgatatgtttgatcctgtttgggagattcgccat
ggtagtgttatggctttgagagaaattttaacacatcatggtggttctgccggagtatat
ttgcctgacttgaactcagatgatgcgctgtttcttgaagtaaaagatatagaatatcca
attaaaattaagagagagagagaaattgatttgaatatgcaagtttcaccagatgaattg
gagccaaatctgaagaagccaaagattgaagatgaaccatttctggtgttggacaaagtg
tcctctgcaggccagcatggtggctttgatgttgcaattaagatcgaggatagtgggtgg
acctttccctcagggcagtttaatggtcaacatgatattagttctatgaagatggagtct
gaattttatgacaatgatgtgatgtaccagtctaaagaagccgttgtagtggaagagcca
aaaagttactatgaagataagggtgcatttgcaaattcagatgtgttaaaagatctacct
gaaaattgcgaacttatcaactttgttaagctagccaggcattcctggcttaagaattgt
gaatttcttcaggactgtgcagttcgcttcttgtgtgtgctatcactagaccgtttcgga
gactacgtatctgatcaggttgttgctccagtacgagaaacttgtgcacaagcattaggt
gctacttttaagtacatgcacccttcattagttcatgaaacattgaatgtcttgctgcaa
atgcagcgtaggccagaatgggaaattcgtcatggaagccttttgggtatcaagtacttg
gttgctgttcgacaggagatgctgcaagatttgcttggctatgttcttcctgcttgtaaa
gctggattggaggaccctgatgatgatgtacgagctgtggctgcagatgctctgatacct
gctgcagatgctattgttgccttaaaaggtcaatcactgcattcaattgttatgctgctt
tgggatatactacttgatttggatgaccttagtccatccactagcagtgttatgaatctg
ttggctgaaatatactcccaagaggatatgatgcccaagatgtttgggacaccaacagct
aaagagaagcagaattttgatctaaatgaagtagttgatgttgaagaggttggagaagcg
aaagatttgcaggaaaatccgtatatgttgtctatgttagcaccacgattatggcccttc
atgaggcacagtattacatcagttcgacactcagccattcgtactttggagaggcttctt
caagctggatataaaaggagcatttctgagccttctggtagttccttttggccatctttt
attctgggtgataccctgaggattgtattccagaacctgctcctagaatccaatgaggaa
attcttcagtgttctgagagggtatggaggttgcttgtgcagtgcccagttggggacttg
gaagttgccgcagcatcctttatgtcatcttggattgaacttgcaactacttcttatggt
tcgacattagatgctacaaaaatgttttggccggttgctcttcctcgaaagagtcaccat
aaagcagcagctaaaatgaaagctgtgaagcttgagaatgaatcttatggaactactgga
ttggattctgtgagaggagctgtttctcaggaaaataatggggatacttcttccaactta
gtgaagataattgtcggtgctgatgcagaaatgtctgtgactaatactagagtcattact
gcttcagcattggggatatttgcatccaagttgcaggcaaattctttgcagtgtgtagtt
gatccattgtggaatgcacttacctccttgtctggagttcaaagacaggtggcatctgtg
gttcttatttcttggttcaaagagatcaaaagcagggattcatcaggaaaccaggaaatt
atacattcttttccagatcatcttagaaaatggttgttggatttgctagcatgttctgac
cctgcattccctactaaagattcggttctaccttatgctgagttgtcaaggacatttgct
aagatgcgcaatgaagctagtcaattactacatgctgttgaatcatctggcatgtttgtg
gatatattgtcaactatgaaagttaacgtagaaagtgtaactgtggatgaggcgatcagt
tttgcttcaaaattgttgttattatctaatgataatgctgagaatgaatcaatgaaaagg
aatattgatgatatagagtcagcaaaacaacgccttatagcaacttcaggctatttaaaa
tgcgttcagagtaatttgcatgttacagtgacctctttggttgctgctgctgttgtctgg
atgtcagagcttcctgcacgacttaatcctataattttgcctttgatggcctcaattaaa
agagaacaggaggaaatactgcaacagaaggcagcagaggcacttgctgaacttatttat
cattgcattgctcgcaagcccagcccaaatgataagttaataaagaatatttgtagtttg
gcgtgctcagatccatctgagactcctcaagctgcagttatcaattccatggagattatt
gatgaccaggatttcctctcctttggtactagtacgggaaaaccaaaatcaaaggttcac
atgctagctggtgctgaagatcgatcaaaagtggaaggttttatcagcagaagagggtca
gaactagcattgagacatttgtgtgagaagtttggtcctacattgtttgagaagcttccc
aaagtctgggattgcattactgaagttcttttgcctagcagtccttcagaagatcatcaa
attgtgcaggctgttgaatctgtcaaagatcctcagatcttgattaataatatccaggtt
gtacgttctattgctccagtactggatgaatccttaaaacctaaactgcttatgcttctt
ccttgcatattcaaatgcgttagtcattcccatgtggcagttagattggccgcgtccagg
tgtattatgactatggccaagtctatgactgtaaatgtaatgcgggctgtgattgagaat
gccattccaatgttgggggatgtgacgtctgtccatgccaggcaaggtgccggcatgctt
attactttacttgttcaaggattgagtgtggagctggttccgtatgcacctttgttagtt
gtccctcttcttaggtgtatgagtgattgtgatcattctgtcagacagagtgtgacacgc
agttttgctgccctggtgcctcttcttccattagcaagaggccttcctccacctgttgga
ctgagtgaaggtttatctagaaatgcagaagatgcaaaatttttggagcaactgcttgat
aattcccacattgatgattacaagctgttcactgaattgaaagtgacactgaggaggtat
caacaagaaggtataaactggttggcctttctaaaacgtttcaagcttcatgggatcttg
tgtgatgatatggggcttggaaagacgcttcaagcatcagcaattgtagcatctgagata
gctgagtatcgtgcttcaaataaggatgtggatcctcctccatccttaattgtttgtcca
tcaacccttgttggacactgggcttttgaaatagaaaaatacattgatgcttctctgata
tccactctccaatatgttggttctgttcaggatcgtgttgctttgagagaacagtttgat
aagcataatgtagttataacatcatatgatgtggtgcgcaaggatgctgagtatcttgca
caatttccctggaactactgtattttagatgaaggacatatcatcaaaagcgctaaatct
aaaataacattggcagtaaagcagctgaaagctcagcacaggttaattcttagtgggact
cccatccagaacaatatcatggatctgtggtccctttttgactttctaatgccaggattt
cttggaacagagagacagttccaagccacctacggaaagccactgctggctgctagagat
cctaaatgttctgcaaaggatgctgaagctggggcacttgctatggaagcattgcacaaa
caggtcatgcctttcctacttcgtcgaacaaaagatgaggttttgtcggacttgccagag
aaaatcattcaggacagatactgtgaccttagccctgcccaattattactttatgaacag
ttctctggttctcatgtgaaacaagaaatttcaagcatggtaaagacagatgagtctgga
gttgcaggaggagcaaagcagacttcaccaaaggcatctacacatgtatttcaggcactg
caatacttgctaaaactttgtagccatcccctgcttgtcgttggagacaaggttccagag
tcacttacatcgcagttgtcagagctttttccagcaaattcagatgtcatttctgaactt
cgtaaactccaccactctcccaaattagttgctcttcaggagattctggaagagtgtgga
attggtgtggatacttctgcttctgatggcgctgtcacagttgggcagcacagagttcta
atatttgctcaacataaagcgttactggatattattgaaaaggacttgtttcacacccac
atgaagaatgtcacatatctacgactggatggatcagttgaaccagaaaagcgttttgac
attgtgaaagctttcaattctgatccaactatagatgccctgctgcttacaacacacgtt
ggtggtcttggtctgaacttgacttctgctgataccctcattttcatggaacatgattgg
aatccaatgcgtgatcatcaggcaatggacagagcacatagattaggccaacggaaagtt
gttaatgtccaccgtctcatcatgcgtggtaccctggaagaaaaagttatgagcctccaa
cggttcaaactatcagttgccaatgctgttatcaatgccgagaatgccagtttgaaaacc
atgaacactgaccagttgctcgatctatttgcctctgccgaaacatctaaaaagggagct
actgcctcaaaacgttcagatagtggtatcgatggagacccgaaattaatgggtacaggg
aagggattaaaagccattcttggtggcttggaggagctttgggatcaatcacaatatact
gaggagtacaatttgagccagtttttagcaaaacttaatggctga
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integrated database retrieval system
