Gossypium raimondii: 105782559
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Entry
105782559 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105782559
KO
K07573
exosome complex component CSL4
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105782559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105782559
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105782559
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105782559
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
105782559
NCBI-ProteinID:
XP_012462829
UniProt:
A0A0D2U312
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Position
13:complement(50006425..50008857)
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AA seq
195 aa
AA seq
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MEEADEMVTPGEVLGRATDLKAGKGAYAASHNNTIYASLTGFRRIQAPPPASHDKRPTVE
VTGHKAHGPVPEPGSVVIARVTKVMARTASADIMCVGPKSVREKFTGIIRQQDVRATEID
KVDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGIVSAESSAGATMVPISWTEMQCP
LTGQIELRKVAKVVN
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagatgagatggtaacgccaggagaggtattaggaagagccactgatctg
aaagcagggaaaggagcgtacgccgcctctcacaacaacaccatctacgcttcccttacc
ggcttccgccgcatccaggcccctcctcccgcttcccatgacaagagaccaactgtggag
gtaactggtcacaaagcccatggtcctgttccagaacccggttcggttgtcattgcccga
gttactaaggtgatggctaggacagcatcagctgatataatgtgtgttggtccgaaatct
gtgagagaaaaattcactggtataattaggcaacaggatgttagagctactgaaattgac
aaagtggatatgcatttgtcatttcgtcctggcgatattgtcagagcagtagtgctgtct
cttggagatgcacgggcttattacctatccacggctaagaacgaattaggcatcgtgtct
gctgaaagctcagctggtgcaacaatggttccgataagttggactgagatgcagtgccca
ttgactggccaaatcgagctaaggaaggtggcgaaggtcgttaactaa
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