Gossypium raimondii: 105782599
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Entry
105782599 CDS
T04129
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
105782599
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Gene cluster
GFIT
Motif
Pfam:
NHL
HAD_2
Hydrolase
Thioredoxin_8
TEN_NHL
Redoxin
SGL
AhpC-TSA
Hydrolase_like
DUF5128
Thioredoxin
Fn1-VW_OTOGL
HAD
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
105782599
NCBI-ProteinID:
XP_052482117
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Position
13:35187569..35205932
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AA seq
1076 aa
AA seq
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MAVRLLSTPTALSHPTKLSFFSSPKPISTATSFFQWRSKCRVFTRKMVVKACVKVEEKNV
KETSKQEWGKVSAVLFDMDGVLCNSENPSRKAAVDVFAEMGVQVTAEDFAPFTGMGEANF
LGGVASVKGVKEFNTEAAKKRFFEIYLDKYAKPNSGIGFPGAFELINECKNKGLKVAVAS
SADRVKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVSPDECIVIEDA
LAGVQAANAAKMRCIAVTTTLTEETLKPAGPSIIRNDIGSVSLDDILSGGSDEMVQDMQF
LQVTEQNPSRILNERTRNGSTPGVDVPSNEVFSLQGLQGSRRDILRYGSLGIALSCLYFA
VSNWKAMQYASPKAIWNMLFAAKNPFFGPSEDESRSARIQQFVNYISDLESRGTAPKVPE
FPAKLDWLNTAPLQFQRDLQGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKAKPFTVVGV
HSAKFDNEKDLGAIRNAVLRYGITHPVVNDGDMYLWRELGVNSWPTFAIVGPNGKLLAQI
AGEGHRKDLDYLVEAALLFYDQKKLLDNKPIPLNLEKDNDPRMLTSPLKFPGKLAIDILN
NRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEDLRDGSFDDATFNRPQGLAYNAKKNLLY
VADTENHALREIDFVNEKVRTLAGNGTKGSDYTGGGKGASQLLNSPWDVCFDPVNEKVYI
AMAGQHQIWEHSIQDGFTRAFSGNGYERNLNGSSSTNTSFAQPSGISVSPDLMEAYVADS
ESSSIRALDLKTGGSRLLAGGDPVFSENLFRFGDHDGVGSDVLLQHPLGVLCAKDGQIYI
ADSYNHKIKKLDPASKRVTTLAGTGKAGFKDGKALAAQLSEPSGIIEAENGRLIIADTNN
SLIRYLDLNKENAEILTLELKGVQPPTPKSKSLRRLRKRSSADTQTIVVNGGSSSEGNLY
LKISLPEEYHFSKEAQSKFTVDIEPENAVSIDPLDGKLSPEGSAKLHFRRSTSSAFTGMI
NCKVYYCKEDEVCLYQSLLFEVPFQEEDQQAKPADIKLVYDVKPKASTNSLQLIAP
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagactattgtcaactccaactgctctgtctcacccaacaaagctctccttc
ttctcatcacccaaacccatatcaacagcaacctccttctttcaatggagatccaagtgc
agagtttttacaaggaaaatggtggtaaaggcatgtgttaaggtggaagaaaagaatgtg
aaagaaactagtaaacaagaatggggcaaggtgtctgctgtactttttgacatggatgga
gtgttgtgcaatagtgagaacccttctagaaaggctgctgttgatgtttttgcagagatg
ggtgtccaagtcactgcggaggactttgctcctttcactggaatgggtgaagcaaacttt
ttaggaggcgttgcttctgttaagggtgttaaagaatttaacactgaggcagcaaaaaag
agattctttgagatatatcttgataagtatgcaaaacctaattctggaataggatttcca
ggtgcttttgagctcattaatgagtgtaaaaacaaaggcctaaaagttgctgttgcatcc
agtgctgatcgtgtcaaggttgatgctaacttagctgctgctggattgccattatcaatg
ttcgatgctattgtgtcagcagatgcttttgagaatctgaaacctgctccagatattttc
ttagctgcatcaaagatattagacgtttcccctgatgagtgtattgttattgaagatgct
ttggctggagtacaggctgctaatgcagcaaaaatgagatgcatagctgtgacaactaca
ttgacagaagagactctaaaacctgctggtccatcaattatcagaaatgatattggaagt
gtttcacttgatgatattctcagtggtggctcagatgagatggtgcaggatatgcagttt
ctgcaagttactgaacaaaatccatcaagaattctcaatgaaagaactcgaaatggatca
acccctggtgtggatgttcctagcaatgaggtcttctcccttcaggggttgcagggttct
aggcgagacatattgagatatggaagtttgggcattgctttatcttgtctctactttgct
gtttcaaactggaaggcaatgcaatatgcatcaccgaaagctatttggaatatgttgttt
gcagccaagaacccattttttggtccctctgaagatgaatcgcgttctgcaaggattcaa
caatttgtgaactatatatctgatctggaatccaggggaactgctccaaaagtgccagaa
tttccagcaaagcttgactggctcaatacagcaccacttcagtttcaaagggatttgcaa
ggaaaagtagttttgctggacttctggacctattgctgtataaattgcatgcatgtttta
ccagatctagactttttggagaagaaatacaaagctaagcctttcacggttgttggagtg
cattcggcaaagtttgataatgagaaggatttaggggccatccgtaatgcagtattgcgc
tatggcatcacacatcctgttgtcaatgatggagatatgtatttatggcgagagttaggt
gtaaattcttggcctacatttgccattgttggacccaacggtaagctgttagcacaaata
gcaggtgaaggccacagaaaggatcttgattatttagtggaagcagctcttcttttttat
gatcaaaagaagttgttggacaacaaaccaattccactgaacctggaaaaagacaatgat
cctcgcatgcttacatctcctttaaagtttcctggcaagctggcgatagatattcttaac
aaccggctcttcatttcagatagtaaccataaccgcatagtggtgactgatttagatggg
aacttcattgtccaaattggaagcacaggagaagaggacttacgtgatggttcctttgat
gatgctacatttaatcgccctcagggcctggcttacaatgcaaagaagaatcttctttat
gttgcagatactgaaaatcatgctttgagggaaattgattttgttaatgagaaggtgcga
actcttgctggaaatgggacaaaaggttctgactacacaggaggcggaaagggagcctct
cagctccttaactctccctgggatgtctgctttgaccctgtcaatgagaaggtctacatt
gcaatggctggccagcaccaaatttgggagcatagcatacaagatgggtttactagggca
tttagtggtaatggatatgaaagaaacttaaatggatcaagctctacaaacacatctttt
gcacaaccttctggaatatcagtgtctcctgatctgatggaggcatatgttgctgatagt
gagagtagctccattcgagctcttgatctgaaaacaggaggatcaagactgctagctggt
ggtgacccagttttctctgaaaatttgttcaggtttggagaccatgatggtgtagggtct
gatgtacttcttcagcatcccttgggtgtcttatgtgcaaaggatggtcagatttatata
gcagacagttataaccacaagatcaagaagctagatccagctagtaaaagagttacaaca
ctggcagggacaggcaaagctggtttcaaggatggaaaggcccttgctgctcagctttct
gaaccatcagggatcattgaagcagaaaatggaagactaattattgctgatacaaacaac
agtctgatcagatatctagatttgaacaaggaaaatgctgaaatccttactttagaactg
aaaggagttcagcctcctacaccaaaatccaaatctttgagacgccttaggaagcgatca
tcagctgacacacagaccatagttgttaatggcggttcatccagtgaggggaacttgtat
cttaagatctctttacctgaagagtatcatttctccaaggaagcacagagtaagttcact
gttgatatagaacctgaaaatgctgtgtctattgatcccttggatggaaagcttagtcca
gagggatccgctaaacttcatttcagaagatccacttcttcggcttttacagggatgatt
aattgcaaggtgtactattgcaaagaagatgaagtgtgcttgtaccaatcactgttattt
gaggtacccttccaagaggaagatcaacaagctaagcctgcagatatcaaacttgtgtat
gatgtgaagcccaaagcatcaacaaacagcttacagttaattgccccctaa
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