Gossypium raimondii: 105782636 Help Entry 105782636         CDS       T04129                                  Name (RefSeq) phytochrome A   KO K12120   phytochrome A Organism gra  Gossypium raimondii Pathway gra04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:gra00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     105782636 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c HisKA PAS_9 PAS_4 Motif Other DBs NCBI-GeneID:  105782636 NCBI-ProteinID:  XP_012462955 UniProt:  A0A0D2W7X4 LinkDB All DBs Position 13:52615253..52619718 Genome browser AA seq 1122 aa AA seqDB search MSSSRHSHSSNNSGRSRHSARIIAQTTVDAKLHADFEESGSSFDYSSTVRVIGDQQPRSD NVTTAYLHNIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLG IGTDIRTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGGLIIDFEP VKPSEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKF HDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVQVFQDD KLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGTNSEQPQQKRKR LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAVHANKELELESQIVEKNILRTQTLLCDML MRDAPVGIVSQSPNIMDLVKCDGAALLYKNKIWKLGATPSDFQLNEIALWLSEYHMDSTG LSTDSLYDAGFPGALALGDVVCGMAAVRITHKDMLFWFRSPTAAEIRWGGAKHEPGVKDD DRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVETTDTNTNAIHSKL GDLRLEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLSVDNAIGKH FLTLVEDSSSETVQKMLFMALQGKEEKNIQFEIKTHGSRTEAGPISLVVNACVNRDLQES VVGVCFVAQDVTAQKIVMDKFTKIEGDYRAIVHNPNPLIPPIFGMDEFGWCSEWNPAMTK LTGWNRHEVVDKMLLGEVFGTNTACCRLKNQESFVNLGVVLNNAVTGNEPEKVPFGFFAR SGKYVECLLCVNKKFDMEGGAVSGVFCFLQLPSHELQQALHIQKLSEQTAMKRLKALAYL KTQIRNPLSGIIFSRKMMEDTELRPEQKRLLQTSSMCQRQLSKILDDSDLSSIIDGYLDL EMIEFTLNDVLIASISQVMMKSTGKGIRILNETAEEVMEETLYGDGVRLQQVLADFLLVS VNFAPKGGQLSVVASLTKDQLGRSVHLARLNLRITHVGGGIPEALLNQMFETDGDATEEG ISLLISRKLVKLMTGDIQYLREAGRTTFIINIELAAANRSRN NT seq 3369 nt NT seq  +upstreamnt  +downstreamnt atgtcatcatcaaggcatagccattcatcaaacaactcaggaagatccagacatagtgct cggattattgctcaaaccactgtagatgcaaaacttcatgcagatttcgaggagtcaggc agctcgtttgattattcgagtacagtgcgtgtaattggagatcagcaaccaaggtcggac aatgttaccacggcgtatctccataacattcagaaaggcaagtttatccagccctttggg tgcttgttagctttagatgagaaaacttacaaggtcatagcgtacagtgagaatgcccct gagatgttgaccatggttagccatgctgtcccaagtgttggggaccatccggttctcggc attggaaccgacataagaaccattttcaccgcccctagttcatctgcattgctaaaggcc ttaggaattggggaggtttctcttttgaatccaatcttggttcattgcaagacttctggg aaacccttttatgcgataatccatcgggtaactgggggcttgatcattgattttgagcct gtcaagccctctgaagttcccatgactgcagctggagccttgcaatcatacaagcttgca gcaaaggcgatcacacggttgcagtcactgcctagtgggagcatggaaaggctttgtgat acaatggtgcaggaggtttttgaactcactggttatgacagagtgatgacatataaattc catgatgatgatcatggggaagtggtatctgagataacaaagccaggtttggagccttat ttaggtttgcattatccagccactgatattccccaagctgctcgatttttgtttatgaag aataaagtccgtatgatcgttgattgtcgagcaaaacatgtgcaagtatttcaagatgat aagcttcctatggacctaaccttgtgtggttcaaccctgagggctccccatagctgccat ttacagtacatggaaaacatgaattccattgcttctctggttatggctgtcatcgtcaat gatggagatgaagaaggtgatgggactaactccgagcagccacaacaaaagagaaagaga ctatggggtctggtagtatgccataacaccactcctaggtttgttccatttcccctcagg tatgcctgtgagtttctagctcaagttttcgctgtccatgccaataaagagttggagctt gaaagtcaaatcgtcgagaagaacatcctgcgaacacagacccttttgtgtgatatgctt atgagggatgcaccagtggggattgtatcacagagtccaaatataatggatttggtgaaa tgtgatggagctgccttattatacaagaataagatttggaaactaggtgcaactccaagt gatttccaactgaatgagatagcgttgtggctttcagaatatcatatggattccactggt ctgagcactgatagcttgtatgatgcggggtttccaggggctctggctcttggtgatgta gtatgtggaatggcagcggtgaggataacccacaaagacatgcttttctggtttcggtcc cctacggcagccgaaattcgatggggtggtgcaaagcatgaacctggtgtgaaggatgat gatcgaaagatgcacccgaggtcatcattcaaggctttccttgaagttgtcaagacaagg agtttgccatggaaggactatgaaatggatgccatccattctttgcagcttattctaagg aatgcgttcaaagacgttgagactacggatacaaacaccaatgccatacattcgaagctc ggtgacctcagactagaagggatgcaagagctggaggcagtgacaagtgagatggttcgt ttgattgaaacggctaccgtgccaattctggcagttgatgtcgatggcctggttaatggt tggaatatgaaaattgcagagttgactggcctttctgttgataatgcaattggaaagcat tttctcacacttgttgaagattcttcatctgaaacagtccagaaaatgttgttcatggca ctgcagggcaaagaagagaagaacatccagtttgagatcaaaactcatgggtcaaggact gaggctggtcccattagtttagttgtcaatgcttgtgtaaacagggatctccaagaaagt gttgtgggggtatgttttgtggcacaagatgtaacagctcagaagattgtcatggacaaa ttcaccaagatcgaaggggattacagagcaatagtacacaatccaaacccactgatccct ccaatatttggcatggatgaatttgggtggtgttctgagtggaatccggcaatgacaaag ttaaccggttggaaccgacatgaagtggtggataaaatgctgttgggggaggttttcgga accaacactgcatgctgtcgtctgaagaaccaagaatcctttgtcaaccttggtgttgtt cttaacaatgcagtgactggtaatgaacctgagaaggttcctttcggtttctttgctcgc agtgggaagtatgttgaatgcttgttatgcgtgaacaagaagtttgacatggaaggtggt gctgtgagtggtgtgttctgtttcttgcagcttccaagccatgaactgcaacaggcactt catatccagaaattatcagaacaaaccgccatgaaaagattgaaagctttagcttatttg aaaactcagatacgtaaccccctgtctggaattattttttctaggaaaatgatggaagac acagagttgagacctgaacaaaaacgccttcttcaaactagttccatgtgccagcgccag cttagcaagatacttgatgattcagaccttagcagcatcattgatggttacttggatctt gaaatgattgaattcaccttgaatgatgtactgattgcttctatcagtcaagtgatgatg aagagcactgggaaaggcatccgaatactgaatgagacagcagaagaagtcatggaggag accttgtatggagatggcgttagacttcaacaagtcttagctgatttcttgttggtatca gttaattttgcaccaaagggaggccaacttagtgttgtagctagcttaaccaaggatcaa ctaggacggtccgttcatcttgcacgtttgaacctcaggataacacatgtaggaggtgga atacctgaagcattgctgaaccaaatgtttgaaactgatggagatgcaacagaggaaggt atcagtttgctaatcagtcgaaaattggtgaaactcatgactggtgatatccagtattta agggaagctggcaggactactttcatcatcaacattgaacttgctgcagcaaataggtcc agaaactaa

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