Gossypium raimondii: 105782695
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Entry
105782695 CDS
T04129
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105782695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105782695
03110 Chaperones and folding catalysts [BR:
gra03110
]
105782695
03029 Mitochondrial biogenesis [BR:
gra03029
]
105782695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105782695
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105782695
Messenger RNA biogenesis [BR:
gra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105782695
Chaperones and folding catalysts [BR:
gra03110
]
Heat shock proteins
HSP60 / Chaperonin
105782695
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105782695
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105782695
Exosomal proteins of other body fluids (saliva and urine)
105782695
Exosomal proteins of breast cancer cells
105782695
Exosomal proteins of colorectal cancer cells
105782695
Exosomal proteins of bladder cancer cells
105782695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
105782695
NCBI-ProteinID:
XP_012463071
UniProt:
A0A0D2VKN6
LinkDB
All DBs
Position
13:58508317..58511653
Genome browser
AA seq
586 aa
AA seq
DB search
MASANALSSASILCSPNKGSLRRKGNQRQNQRVNYRQGNNRFGVKACAKEIAFDQSSRAA
MQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSVKRGIDKTVQSLIEELEKKAR
PVKGRDDIKAVASISAGNDDLIGTMVADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID
RGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGILNVAAIKAPSFGERRKAVLQDIAILTGAEFQANDLGLLIENTSVEQ
LGIARKVIITKDSTQIIADAASKDEIQARVQQLKKELAETDSVYDTEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKLEDS
EERIGADIVQKALVAPASLIAQNAGMEGEVVVEKVKNSEWEIGYNAMTDTYENMLEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPAAAAPEGLTI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcaaatgctctttcttcagcttctattctttgctctcccaacaaggggagt
ttaaggaggaagggaaatcagagacagaaccaaagggtaaattataggcaaggaaacaac
cggtttggtgtgaaggcttgtgctaaagaaattgcttttgaccagagttcaagagctgca
atgcaggctggcattgataagttagctgatgctgttggccttacacttggtcctaggggg
aggaatgttgtgttggatgaattcggaagtccgaaagtagtcaacgatggggtgacaata
gctagagctattgagcttcctaatgccatggaaaatgctggtgctgctcttatcagagag
gttgcgagtaaaactaatgactctgcaggtgatgggacgactacggcatcggtacttgca
cgggaaatcatcaaactaggacttttgactgttacttcgggtgcaaatccggtctcagtg
aaaaggggtatcgataaaaccgtacaaagtttaatagaagagttggaaaagaaggctagg
cctgttaaaggccgtgatgatatcaaagctgtggcttccatttctgctggaaatgatgac
cttattggaacaatggtagctgatgctattgacaaagtcggtcccgatggtgttttgtca
atcgagtcatcgtcttcatttgagaccaccgttgatgttgaggaaggaatggagattgac
agaggttacatctcaccgcaattcgtaacaaatcccgagaaattaatttgtgaattcgag
aatgcaagggtgctagtaaccgatcaaaagattacagctattaaggacataattcccctc
ttggagaagactactcagttaagagctccattgcttataattgctgaggatgttaccgga
gaggctcttgctacacttgtagtgaacaaactccgaggtatccttaatgttgcagccatt
aaagctccgagtttcggcgaaagaagaaaagctgtccttcaagatattgccattcttact
ggtgccgagttccaagcaaatgatctgggtttgttaatcgagaacacctctgttgagcag
cttggtatagccaggaaagttatcatcaccaaggattcaacccaaataattgctgatgcc
gcttcgaaggatgaaatacaagctagggtgcaacaattaaagaaagaactagccgagaca
gattctgtttacgacacagaaaaactggcagaaaggattgccaaactatctggtggtgtt
gcagtcattaaggttggggctgcaactgagactgaactcgaggatcgcaagctacgtatt
gaagatgccaagaatgctacctttgctgccatagaggaaggtattgtacctggtggtggt
gctgcattagttcatctctcgacttgcgtccctgcaattaaggataagcttgaagactct
gaagagcgcataggagccgacattgtgcagaaggctttggtagcaccggcctcgttgata
gctcaaaatgcaggaatggaaggtgaggtagtggtggagaaagtaaagaacagcgaatgg
gagatcggttacaatgcaatgacagacacgtatgagaacatgctggaagctggagttatt
gacccggcaaaggtgacaagatgtgcgttgcagaacgcagcttcggttgcgggaatggtg
cttacgactcaagctattgtcgttgagaaacccaagccaaaggctcctgcagctgctgct
cctgaaggtcttaccatttaa
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