KEGG   Gossypium raimondii: 105782865
Entry
105782865         CDS       T04129                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
gra  Gossypium raimondii
Pathway
gra03420  Nucleotide excision repair
gra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105782865
   03460 Fanconi anemia pathway
    105782865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gra03400]
    105782865
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105782865
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC
Other DBs
NCBI-GeneID: 105782865
NCBI-ProteinID: XP_012463370
LinkDB
Position
13:52693759..52697980
AA seq 400 aa
MEKDEENQNKKKTQIVIGIPSYKEVIESSQTKSTPPSLFTPSQSFSQAFNFIKSSEFYSP
PPPPPPPAPSSPLFTPRPTGEANVPSSSSAASTSASPAVSSSSSQSRNAILVSHRQKGNP
LLKHIRNVRWAFADVACDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLC
HVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDY
LSRLNHALTTVRRVNKTDVVTLGSTFGSLSSIMDASMEDLARCPGIGERKVKRLHDTFHE
PFKRIVSSNPSVPETPVCKDAEPSSASEVIEADKDTEDTSKRRKKENEINIKSALTAAFA
KYAGKNSKMNNKSEGNKGGGTLAAAVPEPATKNSGEGVET
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggagaaagatgaagaaaatcaaaacaagaaaaaaacacaaattgttataggaattcca
tcttataaggaagtaattgagagctcacaaacaaagtcaaccccgccctctctttttact
ccttctcaatctttttctcaagccttcaatttcattaaatcctctgagttctactctcct
cctcctcctcctcctcctcctgcgcccagctcccctcttttcaccccaaggccaactggt
gaagccaatgtgccttcttcttcttcagctgcctctacctcagcttcccctgctgtatca
tcgagttcgtctcagagtcgcaatgctatccttgtcagccataggcagaagggtaatccc
ttgctcaaacatatcaggaatgtgagatgggcttttgcagatgttgcttgtgactacttg
cttggtcagaacacgtgtgccctctatttaagtcttcggtatcatttgctgcatccggac
tacctatactaccgtataagggaactacaaaagaacttcaagcttcgtgttgtgttatgc
catgttgatgtggaggatgttgttaagcctttgcttgaagttactaaaacagctctgctt
catgattgcactctattatgtggttggagcttagaggaatgtggtcgctacttggagacc
ataaaagtatatgaaaacaagcctgcagacctcattcaaggccaaatggatacagactac
ttatcaaggctaaatcatgctcttacaactgttcggcgtgttaacaagactgatgtggtc
actcttggttctacttttgggtctctgtctagtatcatggatgcatccatggaagatctt
gctcgatgtcctggaataggagaacggaaggtaaaacgtttgcacgatacttttcatgaa
cccttcaagcgcatagtttccagtaacccttctgttccggaaactcctgtatgcaaagat
gctgaaccaagctcagcaagtgaagtcatagaagcagacaaggatactgaagatacgagc
aaacgtaggaaaaaagaaaatgaaattaacattaaatcagctctaactgctgcatttgcc
aagtatgctggtaaaaatagtaaaatgaacaataaatccgagggtaataagggaggagga
acccttgctgctgcagtaccagaaccagcaactaaaaattctggggaaggggtcgaaaca
tga

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