Gossypium raimondii: 105782884
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Entry
105782884 CDS
T04129
Name
(RefSeq) eukaryotic translation initiation factor isoform X1
KO
K03260
translation initiation factor 4G
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105782884
03012 Translation factors [BR:
gra03012
]
105782884
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105782884
mRNA cycle factors
Stress granule specific factors
105782884
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
eIF-4
105782884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
COMMD9_HN
Motif
Other DBs
NCBI-GeneID:
105782884
NCBI-ProteinID:
XP_012463406
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All DBs
Position
2:complement(18991470..18997728)
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AA seq
829 aa
AA seq
DB search
MQQGDQTVLSLRPGGGRGSRLFGAPSSSSSSSSLAFGSLSSDLPVFRPHAGAPPAFSIKA
GDSRFEGRECVQYTRDQLLKLRVAVEVSDDILKIKREIEVELFGEDQNRTRGESNPPNQS
QNRYSEPDNRDWRNRSAQFSSDGEERSWESLHDRELGNHYDSKQPEASQFNRRAQISFNQ
LNCSFWMVGQLRSISVACIPRPAPAPMINFFYKDNIQGTLPLIVFILALYLFLREGGQTP
ALVKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKYDLLKGQLIDSGITSADILKGVI
SLIFEKAVLEPTFCPMYALLCSDLNDKLPSFPSDEPGGKEITFKRVLLNNCQEAFEGADK
LREEVAQMTAPELEMERREKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHD
TKGCPVEENVEAICQFFNTIGKQLDESLKSRRINDAYFNRLKELVTNPQLASRLRFMVRD
VLDLRADNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNSRIVSVGPISPGGLPI
TRPGTGGLMPGMPGTRRMPGMPGMENDNWEVPRTRSMPRGDGLGMLPVGRVPSPSINKPT
SVNPRLLPQGSGGLMSGRTSALLQGSSSPPVAQPSLPAKPVLVAAVSPALEKPVTPASRL
NQDELSRKTKALLEEYFSVRLLDEALQCVEELKSPGYYPEVVKEAISIALEKIPPCVEPV
SKLIEYLFIKKVLTARDIGTGCLLYGALLDDIGIDLPKAPNNFGEIIGKLALAGGLDFNV
VREILKKMEDDLYQKAVFDAAMRIVSSSPSGQAVLEAQASEVKVCQSLF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagggtgatcagacggtgttaagcttaagacctggtggtggtcgagggagcaga
ctctttggtgctccctcttcttcatcctcctcctcttcgttagcctttggttccctttct
tctgatcttcccgtctttcgtccccatgctggtgctcctcctgccttttctatcaaggct
ggagactcacgatttgagggccgtgaatgtgtgcagtacactagggaccagcttctaaag
cttagggtggctgtagaagtttccgacgatattcttaaaatcaaacgagaaattgaagtg
gaactctttggtgaagatcagaaccggactcgtggagaaagtaacccaccaaatcaaagt
cagaaccgttactctgagcctgacaatcgtgattggcgtaaccgttcagcacagttttca
tctgacggagaggagaggtcctgggaatcacttcatgatagagaattggggaaccattat
gactccaagcaaccagaagctagtcaattcaatcgtcgagcacaaatctcctttaaccaa
ctgaattgttctttttggatggtggggcagttgcgaagcatatcagttgcttgcatccca
cggcctgcaccagctccaatgattaattttttctataaggataacattcaaggaactctt
ccacttatagttttcattttagctttgtacttattcctgcgagaggggggacaaactcca
gctttggtgaaggctgaggtgccatggtctgctagaaggggcaacttatctgaaaaggat
cgtgttctaaagactgttaaagggatattgaacaagctgactcctgagaagtatgatctt
ctgaagggccaacttattgattctggtattacatcagctgacatcttgaagggggttatt
tctctaatatttgagaaggctgttttggaacccacattttgtcctatgtatgctctttta
tgttctgatctcaatgataagctcccttcattcccatccgatgaacctggtggaaaagaa
attacatttaagcgagtcctcttgaataactgtcaggaggcatttgagggagctgacaag
cttagggaagaagtggcgcagatgactgcccctgagctagagatggagcgtagggaaaaa
gaaaggttggtcaaacttcgtactctaggtaacattcgtttaattggtgagcttctgaag
caaaaaatggtacctgagaagatagtccatcacatcgtgcaggaacttttgggccatgat
actaaaggctgccctgtggaggagaatgttgaagcaatttgtcagttcttcaatactatt
ggtaagcagcttgatgagagcctgaaatcacgacgcataaatgatgcatatttcaataga
ctgaaggaattggtcacaaatcctcagcttgcttcaagactgagatttatggttcgtgat
gttcttgatctgcgtgctgacaattgggttccaaggcgtgaagaggtgaaagccaaaaca
attactgaaatccattctgaagccgaaaaaaatcttgggctgcgtcccggtgctactgca
agtattagaaatagtcgtattgtttctgttggtccaattagtcctgggggtttgcccata
actcgtcctggtactggaggtttgatgcctggaatgccgggaactcggagaatgcctggt
atgcctggaatggaaaatgataactgggaggttcctagaacacgatcaatgccaaggggt
gatggactgggtatgctacctgtagggcgtgttccctcaccttcaatcaataaaccaact
tcagtgaatccaaggttgttgcctcaaggtagtggtggcctaatgagtggtaggacaagt
gccctgttgcagggaagctcatcccctcctgtggcacaaccttctcttcctgccaaacct
gttctggtggctgctgtgtctccagctttggagaaaccagttacaccagcttcaagactg
aatcaagatgaacttagtagaaaaacaaaggcactgttggaggaatatttcagtgttagg
ctgctggatgaagcattgcagtgtgtggaggaactaaaatctccggggtactatcccgag
gttgtgaaagaagcgatctctattgccttggagaaaatcccaccttgtgtcgagccagtt
tcaaagcttatagaatacttgtttattaagaaagttcttacagctagagacatagggacg
gggtgtctgctctatggtgccttgttggatgatattggcattgatttaccaaaagcacca
aataatttcggagaaataattgggaaacttgcattggctgggggattagattttaatgtg
gtaagggaaatccttaagaagatggaagacgacctgtaccaaaaagctgtatttgatgca
gcaatgaggattgttagctcaagtccttcggggcaagctgtgttggaggcacaggcatct
gaggtcaaggtttgtcagagtctattctaa
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