KEGG   Gossypium raimondii: 105782885
Entry
105782885         CDS       T04129                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105782885
   03400 DNA repair and recombination proteins [BR:gra03400]
    105782885
Enzymes [BR:gra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105782885
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105782885
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105782885
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 ResIII DEAD zf-RING_5 zf-RING_UBOX zf-rbx1 zf-ANAPC11 U-box AAA_34 Prok-RING_4 RING_XB3-XBAT31 Rad50_zn_hook TRAF3_RING SWI2_SNF2 DUF1644 zf-C3HC4_4 zf-RING_4 zf-Nse
Other DBs
NCBI-GeneID: 105782885
NCBI-ProteinID: XP_012463410
UniProt: A0A0D2TSD3
LinkDB
Position
13:complement(65047..69629)
AA seq 863 aa
MEELASSVDELWEDQESSSQSSFDTYLLGFVIANIVGLQYYRGKISGREMVGLVREPLNP
YDGNALKVLNTRTLQVGHIERSVAAVLSPLIDSHLIVVEGIVPNSRSASNRYKIPCQIHI
FARLEAFNSVKSAISRGGLELISHSDVSFTLSEAAVVKGNRAGGESQSLDKVFKLVEKNV
SKKAAMEPIEPPNEVIISQLLLHQKEGLGWLLHKENSNELPLFWEEKGGEFVNVLTNYQT
DKRPEPLRGGIFADDMGLGKTLTLLSLIAFDKFGSFVPNSGDAGIEEIVEEDVKKGKRGR
GASKKGTRPLKKRNTKEAEFGSKAKGKSVSVADGCVSFSGRRTTLVVCPPSVFSSWITQL
EEHTSPGKLKVYMYYGGERTKEVEELKKYDIILTTYSTLATEESWFDSPMKKIEWWRVIL
DEAHVIKNANAQQSKAVTNLKATCRWVVTGTPIQNGSSDLFSLMAFLRFEPFSIKSYWRS
LVQRPLAQGNKNGLSRLQVLMASISLRRIKGNNLVGLPPKTLQTCYVELSVEERELYDQI
EGKAKNVIEEFIANDSLVRNYSTVLGMLLRLRQICTSLALLPLDLRALFPSSNVEDVSNN
PELLKKMVVMLQDGEDFDCPICISLPVDVVITRCAHIFCRSCILKTLQRTKPCCPLCRQP
LSQSDLFSAPPKSSEADHTEISSRNPTSSKVSALLSLLRESRDQKPATKSVVFSQFRTML
LLLEKPLTDAGFKILRLDGSMNAKKRAQVIEEFQVPGLDGPTVLLASLKASGAGINLTAA
SRVYLIEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERVLELQERKKKLATEA
FGRKGPKHRKEVTIDDLRTLMSL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggaagaattggcgtcgtccgttgatgaattatgggaggatcaagaatcctcttcccag
tcttccttcgatacttatttgcttggctttgtcatcgccaatatagtaggccttcagtat
tacagaggcaaaatcagtggccgagaaatggtgggacttgtgcgagaacctctcaaccct
tacgacggaaacgccctcaaagttctcaacactagaacccttcaagtgggccatatcgag
cgttccgtagccgccgtactttcgcctttgattgactctcacttgattgtcgtcgaaggt
atcgtgcctaattctcgtagtgctagtaataggtataaaatcccctgccaaattcacatt
tttgctagattagaagcctttaattctgttaaatccgcgatttcacgaggtgggttggag
ttaatttcccactctgatgtgtctttcacgttgtctgaggctgctgtggttaagggaaac
agagctggaggagagtcccagagtttggataaggttttcaagttggtcgaaaagaatgtt
agcaagaaggcagcaatggaacccatagagcctccaaatgaggttattatatctcagctt
ttgttgcaccaaaaggaaggtttaggatggttactccataaagaaaattcgaatgagttg
cctcttttttgggaggagaaaggtggagaatttgtaaacgtgttgacaaattatcagact
gataaacgtcctgagcctttgcgaggagggatttttgctgatgatatgggattaggtaag
actctaactttgctttctttgattgcgtttgataaatttggtagctttgttcccaattct
ggtgatgctggtatagaagagattgttgaggaggatgttaagaagggaaagaggggtaga
ggagctagtaagaaaggtactagacctctaaaaaaacgtaatactaaggaagctgaattt
ggcagtaaagctaaggggaaatctgtcagtgtagctgatgggtgtgtcagtttttctggc
cgaagaacgacattagttgtgtgccccccctctgtgttttcatcatggataacacagctt
gaggaacacactagtccggggaaattgaaggtgtatatgtattatggaggagaaagaact
aaggaagttgaggagcttaagaagtatgatattattttgactacttatagtactctggcc
actgaagaatcttggtttgactctcctatgaagaagatagagtggtggcgagtcatctta
gatgaggcacatgtgattaagaatgcaaatgcccaacagagtaaagctgtcactaatttg
aaggccacttgtagatgggtcgttacaggaactcccatccaaaatggctcatctgatttg
ttttctttgatggcatttttgcgattcgaaccgttttctatcaagagctattggagaagt
ttggttcaacgaccccttgctcagggtaataagaatggtctctcacgtctccaggttctg
atggccagcatctccttgcggagaataaagggtaataacttagttggattgccacctaaa
acattacaaacatgttatgttgagctttctgtagaagagcgtgaactttatgaccagatt
gaaggaaaagccaaaaatgttatcgaggagttcattgcaaatgacagtctagtgcgcaac
tattcaaccgtgcttggcatgcttttacgacttcggcagatttgtactagtcttgccctg
ttacctctggatctccgagcgttgtttccatctagcaatgttgaagatgtatccaacaac
ccagagttgctaaaaaagatggttgtgatgctacaagatggcgaggatttcgactgtcct
atttgcatctctcttcctgttgatgtagtaattacacgttgtgcccatatcttttgccga
tcctgcatccttaaaaccctacagcgtacgaagccatgctgccctttgtgtcgtcaaccc
ttatctcagtctgatctcttttcagcccctccaaaatcttctgaagctgatcacactgaa
atatcatcaaggaaccccacatcatcgaaagtatctgctctactaagcctccttcgggag
tcaagagatcaaaagccagctacaaagtcagttgttttctctcagttccgaactatgttg
ctactacttgaaaagccgctgacagatgctggttttaagatattgcgtttagatggatca
atgaatgcaaaaaagagagctcaagtgattgaagagttccaagttccaggactagatggg
ccgacagttttgcttgcaagtctcaaggcttcaggtgcaggtatcaaccttacagctgct
tctagagtttacttgatagaaccatggtggaacccagctgttgaggaacaggctatggat
agggttcatcgtatcgggcagaaggaagatgtaaagattgtgaggctgattgctcgaaac
agcattgaagagagggtattggagttgcaagagaggaaaaagaaactagcaacagaagct
tttggaaggaagggccctaagcatcggaaagaagtcacgatagatgatcttcgcactctc
atgtccctatga

DBGET integrated database retrieval system