Gossypium raimondii: 105783025
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Entry
105783025 CDS
T04129
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105783025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105783025
03036 Chromosome and associated proteins [BR:
gra03036
]
105783025
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105783025
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
105783025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
105783025
NCBI-ProteinID:
XP_012463640
UniProt:
A0A0D2W5B2
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Position
13:32547473..32555638
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AA seq
1209 aa
AA seq
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MDEGNNKSIANNVARAIVAAFDWNSTPDARKAAVSYLESIKAGDIRVLANTSFCLVKKDW
SSEIRLHAFKMLQHLVRFRWEEFGPLEHRNFANATFELMSEIADNCEEWALKSQTAALVA
EIVRREFLNLWQELLPSLVSLSSKGPVQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEILPLLYTLLERHFGAAMNEVGRQQLDIAKQHAAAVTATLNAVNAYAEWAPLS
NLSKYGIIHGCGFLLSSPDFHLHACEFFKLVSPRKRPVDDSASDFDSAMSSIIQILMNVS
REFLVRSSPAGGAIDESDYEFVEYVCESMVSLGSSNLQCIVGDSTTFSLYLQQMLGFFQH
FKLALHYKSLQFWLVLLRDAMSKPKLSVHSSGDGLTATNVDSTLAQVDEEKRKILSFLND
DICSTILDISFQRMLKKEKLMTETALSPGILELWSDDFESKGDFGQYRSRLFELIKFIAS
NKPLVAGAKVSVRIIMIIKSLLNSPMPAQDLAVMESMQMALENVVISIFDGSNEFAGGSS
EVHLALCRIFEGLLRELLSLNWTEPALVEVLGHYLEAMGPFLKYFPDAVASVINKLFELL
NSLPFIVKDPSTSSARHARLQICTSFIRIAKAADKSILPHMKGIADMMACLQREGRLLRS
EHNLLGEAFLVMASTAGIQQQQEVLAWLLEPLSQQWIQIEWQNNYLSEPLGLVGLCSERA
FMWSLFHTVTFFEKALKRSGTRKGNSNLQNSSTAISTPHPLASHLPWMLPPLLKLLRGIH
SLWSPSVFQMLPGEIKAAMSMSDVEQSSLLGGGNPKLSKGALTFVDGSQFDMNKEGYIKP
NEADIRNWLKGIRDSGYNVLGLSTTIGDPFFKCIDIDFVALTLIENIRSMEFRHTRLLVH
SILIPLIKSCPLDMWEVWLERLLHPLFVHCQQALSCSWSSLLHEGRANVPDNHGILTGSD
LKVEVMEEKLLRDLTREICSLLSTIASSGLNASLPSLEHAGHVGRVDTSSLKDLDAFASS
SMASFLLKHKSLAIPVLQISLEAFSWTDSEAVTKVCAFSAAVVLLAIFTNNVDLREYVSR
DLFSAVIQGLALESNAVISADLVSLCRDIFIYLCNRDPGPRKILLSLPCISPNDLHAFEE
ALTKTASPKEQKQLMKSFLLLATGNNLKALAAQKCVNIITNVTARPRSSVNAPENRIDEG
ETVGLAAIL
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggcaacaacaaaagcatagcaaacaatgtggccagagccattgttgctgct
tttgattggaactccactcccgatgctcgcaaagccgccgtttcttaccttgaatccatt
aaagcaggagatatacgggttttggcaaacacatcattctgtttagtgaaaaaagattgg
tcttcagagattcgcttgcatgcatttaaaatgctacagcacttggttcggtttcggtgg
gaggaatttggtcctttagaacatagaaactttgcaaatgctactttcgagttaatgtca
gaaattgcagacaattgtgaagaatgggctttgaaaagtcaaactgctgcacttgttgct
gagattgttagaagagaatttctaaatctttggcaggagctgcttccctctcttgtttcc
ctatccagcaaaggtcctgtacaagctgaattggtctccatgatgctgagatggctacct
gaagatattacggtccacaatgaagatttggaaggtgatcggcgtaggttactgttacgt
gggcttactcaatctttgccagaaattttgccactactgtacactttactggaaaggcat
tttggagctgcaatgaatgaggtgggtagacaacaacttgatattgcaaaacagcatgca
gctgctgtaacagctactttaaatgctgttaatgcctatgctgaatgggctcctttgtcc
aatctttctaaatatggcatcattcacgggtgcggttttctactttcttctcctgatttt
caccttcatgcttgcgagtttttcaaacttgtctctccaagaaagagacctgtggatgac
tctgcttccgacttcgattccgcaatgagtagcatcattcaaatcttgatgaacgtatcc
cgagaatttttggtcagatctagcccagctggtggggctatagatgaaagtgactacgag
tttgtggaatatgtatgtgaaagtatggtgtctttgggttcctcaaacttgcaatgtatt
gttggagatagcactacattctcactctatttacagcagatgcttgggttttttcaacat
tttaagctagctcttcattacaaatccctgcaattttggttggtgctgttgagggatgca
atgtcaaagccaaagctttcagtacattcatctggagatgggttgactgctaccaatgtg
gactctactttggctcaggttgatgaagaaaagagaaagattttaagttttctgaatgac
gatatttgtagtacaattctcgatatatctttccaacgcatgcttaagaaagaaaagctc
atgactgaaacagccctttctccggggattttggaattgtggagtgatgattttgaaagc
aagggtgattttggccagtaccgttctaggctgtttgagttaatcaagtttattgcgtca
aacaagcctcttgtggctggtgctaaagtttccgtaagaattattatgatcattaagagc
ctcttgaattctccaatgccagctcaggacttggctgtgatggaaagcatgcaaatggct
cttgaaaatgttgtcatctctatttttgacggatcaaatgagtttgccgggggtagttca
gaagttcacctggctttatgtagaatatttgaaggtttacttcgggaacttctttctttg
aattggactgagccagcccttgtggaagtacttggccactatctagaagcaatgggtcct
ttcctcaagtattttcctgatgcagttgccagtgtcatcaataagctttttgagctccta
aattcacttccttttattgttaaggatccttcaacgagcagtgcacgacatgcaaggttg
cagatttgtacgtcatttattcgaatagcaaaagctgctgataaaagtattctgcctcat
atgaagggtattgctgatatgatggcatgtttgcaaagagaaggtcgtttgcttcgtagt
gaacataatcttcttggtgaagcatttcttgtcatggcttctactgcggggattcaacag
cagcaagaagttttggcatggttactcgaacctttgagccaacagtggatacagatagag
tggcaaaataattacttgtctgaacctcttggtctagttggtttatgctctgagagagca
tttatgtggtcacttttccacactgtgacattcttcgagaaagcacttaagaggagcgga
acaaggaaaggcaattctaacttacagaacagctcaacagcaatttctactccacatcca
ttagcttctcatctgccgtggatgcttcctcctctcttaaaactgcttcgtggtatacat
tccctttggtcaccatctgtattccaaatgttacccggagaaatcaaagcggcaatgagc
atgagtgatgtggaacaatccagtcttcttggtggtgggaacccaaaattgtcaaagggt
gcattaacttttgtagatggatctcagtttgatatgaataaggaaggatatatcaaacca
aacgaggctgacatacgaaattggctaaagggtattcgagacagtgggtacaatgtattg
ggcctatctacaaccatcggggatccgtttttcaagtgcattgacattgattttgttgct
ttaactctaatagaaaatatacggtcaatggagttcagacatacacggctgcttgttcat
tctattttgattccgctaattaagtcctgtcctctggacatgtgggaggtatggcttgaa
aggctactgcacccattatttgttcattgtcagcaagctctaagctgttcatggtccagt
cttttgcacgaaggccgagcaaatgtccccgataatcatgggattctcaccgggtctgac
ttgaaagtggaagtaatggaggagaaactgcttcgagatttaactcgtgagatatgttca
ctcctctctactatagcatcatctggattaaatgccagccttccttcgttagaacatgct
ggccatgttggccgcgtcgacacatcttctctgaaagatttggatgcatttgcttcgagc
tctatggccagtttccttttaaagcacaagagcctggcaattccagtgttgcagatttct
ttagaagcattttcttggaccgacagtgaagcagtgaccaaagtttgtgctttctctgct
gctgtagttcttctagctatatttacgaataatgtggatctcagggaatatgtttcgaga
gatctattttctgctgtcattcaaggtctggcccttgagtcaaatgctgttatcagtgcc
gatcttgttagtctctgtcgtgacatattcatatatctatgtaacagagatccaggcccc
aggaagattttactctccctcccatgtattagccccaatgacttacatgcctttgaagaa
gccttgacaaagacggctagtccgaaagaacaaaagcagcttatgaagagcttcctttta
ttagctaccgggaacaacttaaaggctcttgctgctcagaaatgtgtaaacattataaca
aatgtcacagcaaggccacgtagttcagtcaatgctccagaaaatagaatcgatgagggg
gaaactgtaggattggcagctattttgtga
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integrated database retrieval system
