Gossypium raimondii: 105783038
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Entry
105783038 CDS
T04129
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
gra03440
Homologous recombination
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105783038
03420 Nucleotide excision repair
105783038
03430 Mismatch repair
105783038
03440 Homologous recombination
105783038
03460 Fanconi anemia pathway
105783038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105783038
03032 DNA replication proteins [BR:
gra03032
]
105783038
03400 DNA repair and recombination proteins [BR:
gra03400
]
105783038
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105783038
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105783038
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105783038
MMR (mismatch excision repair)
105783038
DSBR (double strand breaks repair)
HR (homologous recombination)
105783038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
105783038
NCBI-ProteinID:
XP_012463659
UniProt:
A0A0D2VHE0
LinkDB
All DBs
Position
13:54951544..54954659
Genome browser
AA seq
629 aa
AA seq
DB search
MPVNLTRNAIAMMNSGDVNSKPLVQVVDIKLIGNSQERYRFLLSDSESTQHAMLATQLNE
QVRTGRVKKGSIIQLIDYICSTVQNRRIIVVLNMETIIPEYEIIGNPKLPTGSEPEANKS
MPNNNLLEPSTRSTNNRYSAPAPANKAQSFQPTIQPAYQPPPNYKIQGPIMKNEAPARII
PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR
FYNVIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESNSTVELCPDEDGSIPRQQFSFR
PITEIESAENNSLLDVIGIVISVNPSVPILRKNGMETQRRILNLKDASGKSVELTLWGDF
CNKEGQKLQEMVDSGLFPVLAVKAGKVNDFNGKSVGTISSTQLFIDPDCPEAQGLRAWFE
SGGRNTASISISKELMPGGSKNEIRKTLTQIKDEGLGRSDKPDWVTAKATVVFIKTDNFC
YTACPLMVGDRQCNKKVTQSGNKRWLCDRCNQEFEECDYRYLLQVQIEDHTGLTWVTAFQ
EAGEEILGCSAKEMYLLKYELQDDTRFGEIIRSRLFHQYLFRLKIKEELYGDEQRVKITV
VKVDKVNYSAESRYLLDMVTKNFPNRKQF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctcacgcgcaacgcgattgccatgatgaacagcggcgatgttaactcc
aagccgttggttcaggtggtggatattaagctgattggcaactctcaggagaggtaccgg
tttttgttatccgattctgaatcaactcagcacgcaatgctcgccactcagctcaatgaa
caagtcaggaccggacgagtcaagaaaggatctatcatccagttgatcgattacatttgc
agcactgtccaaaatcgcaggattattgttgtgctgaatatggagactataattccagag
tacgaaataatcgggaatcctaaacttcctacgggttctgagccagaagctaacaagtca
atgcctaataacaatttgttggagccttctacgaggtccaccaataatagatatagcgcc
ccagctcctgctaataaggcccagagttttcagccaactattcaacctgcataccagcca
cctccaaattacaaaattcagggcccaataatgaagaatgaagcaccagcacgcattatt
cctattgctgctctaaatccttatcaaggacgttgggctatcaaggctcgagtgactgca
aaaggggaccttcgtcgctacaacaatgctagaggagatgggaaggtcttctcctttgac
ctccttgactctgatggaggggaaatacgggtgacttgcttcaatgctgttgttgatcgc
ttctacaatgttattgaagttggtaaagtttacttgatttcaaagggtagcttgaaaccc
gcgcaaaagaatttcaaccatttgaagaatgagtgggagatattcttggaatcaaattca
accgtggagctttgccctgatgaagatggctctattccaagacaacagttctccttcaga
cctatcactgaaattgagagtgctgaaaacaattctctacttgatgttatcggtattgtg
atatctgttaacccttcagttcctattttgaggaagaatggtatggaaactcagagaagg
attctgaatttaaaggatgcatctggaaagagtgttgagctaaccctttggggtgatttc
tgcaacaaggaaggtcaaaagctgcaagaaatggtcgattctgggcttttcccagttttg
gcggttaaagctggaaaggtcaatgacttcaatgggaagtccgttggcactatttcttcc
acacagctctttatagatccagattgtccagaggcacagggcctgagagcgtggtttgaa
agtggggggagaaatacagcttctatctcaatttctaaagaacttatgcctggaggatcc
aaaaatgagatacgtaaaaccttgactcagatcaaggacgaaggtctcggaagatctgat
aagccagattgggtcacagccaaggcgactgtagttttcattaaaacagataatttctgt
tatacagcctgcccattgatggttggagatagacaatgcaataagaaagtaacacaatca
ggtaataaaagatggctttgtgaccgttgcaaccaagaattcgaggaatgtgattacaga
tatcttctccaggtccagattgaagaccatacaggactcacttgggtaacagctttccag
gaagctggcgaagaaatcttgggatgctcggcaaaggaaatgtatttgttgaaatatgaa
ttgcaggacgatacccgattcggtgaaataattcgcagccgactctttcaccaatatctg
ttcaggcttaaaataaaagaggaactctatggtgacgaacagagggtaaaaatcactgtg
gtgaaggttgacaaggtgaactactctgcagaaagcaggtaccttctcgatatggttaca
aagaattttccgaatagaaaacaattctga
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