Gossypium raimondii: 105783233
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Entry
105783233 CDS
T04129
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03410
Base excision repair
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105783233
03410 Base excision repair
105783233
03420 Nucleotide excision repair
105783233
03430 Mismatch repair
105783233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105783233
03036 Chromosome and associated proteins [BR:
gra03036
]
105783233
03400 DNA repair and recombination proteins [BR:
gra03400
]
105783233
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105783233
DNA Replication Termination Factors
ELG1-RFC complex
105783233
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105783233
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105783233
Check point factors
HRAD17(Rad24)-RFC complex
105783233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Sigma54_activ_2
Rad17
AAA_lid_RFC1
AAA_22
AAA_23
Mg_chelatase
ABC_tran
DUF815
AAA_5
nSTAND6
RuvB_N
AAA_29
AAA_2
AAA_16
RsgA_GTPase
nSTAND3
AAA_24
TPGS1_C
Motif
Other DBs
NCBI-GeneID:
105783233
NCBI-ProteinID:
XP_012464019
UniProt:
A0A0D2VG14
LinkDB
All DBs
Position
13:complement(51038359..51042882)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQAMVHQEIALNLKKLVAEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSAEKVKVENKNWKIDAGSRTIDLELTMLSSANRVELSPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLILNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNIRINAPSEEQIIKVIEFIGKKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQY
PFTSNQAISPMDWEEYISEIATDIMKEQSPKRLFEVRGKVYELLINCIPPEIILKRLLHE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgataaataccgacccaaaaccctagaccaagctatggttcatcaagag
attgccctgaatctcaagaaactggttgcagagcaggattgccctcacttactcttctat
ggaccatctgggtctggcaagaaaaccctaattatggctctccttagacaaatttttggt
ccctctgctgaaaaggtgaaagtggagaataagaattggaaaattgatgctggaagtaga
acaattgatctggagttgaccatgttgtcaagcgccaaccgtgtggaattgagtccaagt
gatgcaggctttcaggacagatacatagttcaagagataattaaggaaatggctaaaaat
agaccaattgataccaaagggaaaaaaggatataaagtgctgattctcaatgaagttgac
aagctttcaagagaagcccagcattcactccgaagaacaatggagaagtacagtgcttct
tgccgtctaattctgtgctgtaatagttcttcaaaagtcactgaagccattcggtctcgt
tgtttgaacattcgaataaatgctccttcagaagaacagatcattaaggtgatagagttc
attggaaagaaagaagggttgcaacttccatctggttttgcggcccgcattgcagaaaag
tcaaataggagtttaaggagagctatattgtcatttgagacttgccgtgttcaacagtac
cctttcacaagcaaccaagcaatttcgccaatggattgggaggaatatatatctgaaata
gcaactgatataatgaaggagcaaagccctaaaaggctgtttgaggttcgagggaaggtg
tatgaattgcttataaattgtattccacctgagattatcctgaagaggcttcttcatgag
ttattgaagaaattggatgcagagctaaaacacgaggtgtgccattgggctgcatattat
gagcataggatgcgtcttggacagaaagccatctttcatattgaagcatttgttgccaag
ttcatgagcatttacaaggccttcctgattgcaacatttggctga
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