Gossypium raimondii: 105783302
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Entry
105783302 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105783302
Enzymes [BR:
gra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
105783302
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105783302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Serglycin
Motif
Other DBs
NCBI-GeneID:
105783302
NCBI-ProteinID:
XP_052481945
LinkDB
All DBs
Position
13:42291203..42296970
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AA seq
641 aa
AA seq
DB search
MASNKSKGAKSKNQPPKKKQRNDLFIDKKRPAKKDEVLDDVSDGHSEEEEEAGDLLDGDE
QMSDFDDDDVSEISDEDDAPWADDFLQGSDDNEDTHFDSGSSSTSGSGSDSHSDETDIEE
KSRAIDEQRAREEEDAQAEMELNIKEESDEFRLPTKEELEAEQQRPPDLANLQMRMKEIV
RVLSNFKHMRQEGTTRKDYIDQLKIDLGSYYGYNEFLIRVLVDMFPVVELMELIEAFEKP
RPTCIRTNTLRTRRRDLADVLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYY
IQGASSFLPVMALAPQEKERVVDMAAAPGGKTTYVAALMKNSGIIYANEIREARLKSLTA
NLHRMGVTNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVITKDPSVKTSKSLDDIQ
KCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVPENEAVSDYALKKRDVKVVPCGLD
FGSPGYIRFREHRFHTSLENTRRFYPHVHNMDGFFVAKLKKMSNAKKNPVNSEDLETVVQ
TQRPENTPIDKDNTEELKQNLKKQGNKGKMXSLKKNVLSRNGKVESPPTSKTKKRTETGK
VESPLSSKKRKRRFPSKEEISEAREGKRKAMREKRKQGRKE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaataagagcaaaggagcgaaatcaaagaaccaacctccaaaaaagaagcaa
aggaatgatcttttcattgataaaaagcgacccgccaaaaaagatgaggttttggatgat
gtctctgatggccacagcgaagaagaagaagaagctggagacttattggatggagatgaa
caaatgtctgattttgatgatgatgatgtctctgaaatttcagatgaggatgatgctccc
tgggctgatgatttccttcaaggaagtgatgataatgaagatacccattttgacagtggt
tcaagttccacttcaggttcaggttccgattcccattcagatgaaacagatatagaggag
aagtccagggctatcgatgaacaacgtgcgagggaagaagaagatgcacaagctgagatg
gagctgaacattaaagaagagtctgatgagttcagactgccaacaaaagaggaacttgaa
gcagagcaacaacgtccgcctgatcttgcaaatcttcagatgagaatgaaagagattgtt
cgagtgctctcaaattttaagcatatgaggcaagaaggaacgacaaggaaggattatatt
gaccaacttaaaattgatttgggttcttactatggctacaatgaattcctgatcagggtt
ttggttgatatgtttccggttgttgaactcatggaacttattgaagcttttgaaaagcct
cgacctacatgtatccggacgaacactttaaggactcgcagaagggatctggccgacgtt
ctttccaaaagaggagtagaactggatcaattaagcaagtggtcaaaagttggattggtg
gtgtataattcgcatgtgcccattggtgccactccggagtatttggctggcttttactat
atacaaggtgcaagctcctttttgcctgttatggctcttgctcctcaggagaaggaacgg
gtagttgatatggcagctgcacctggtggtaaaacgacttatgttgctgcgctcatgaaa
aatagtggaataatttatgcaaatgaaattagggaagcaagactgaagtcacttactgca
aatttgcatcgcatgggtgtaacaaacacaatagtttgtaattatgatgggagggagctt
cccaaggttttgggtcagaattcagtcgatagagtgttgttggatgctccttgtagtggt
accggggttataactaaagatccatcggttaagacctctaaaagtttggatgatatacaa
aaatgtgcccatttgcagaagcaactgatacttgctgcaattgatatggttgatgcaaat
tccaaatctggcggatacattgtttactcgacatgctcgataatggttccagagaacgaa
gcagtcagcgactatgcactcaagaagagagatgtcaaagtagtaccgtgtggacttgac
tttggaagtcctggatatatccggtttagggagcatcggtttcacacctccttagaaaac
acaaggcggttttatcctcatgtccacaatatggatggattttttgtggccaagttgaag
aaaatgagcaacgcgaagaagaatcccgtaaattctgaagatctagaaaccgttgtgcaa
actcagagaccggagaatacccctatagataaggacaacacagaagagcttaaacaaaac
ttgaagaaacaaggcaataaagggaaaatgtagagcttaaagaagaatgttttatccaga
aatggaaaggtagaatcacctccaacatcaaaaacgaagaaaagaactgaaactggaaag
gtagagtcgcctttgtcatcgaaaaagaggaaaagaagatttccctcaaaagaagaaata
tctgaagcaagggaaggtaaaagaaaggcaatgagggaaaaaaggaagcaaggaaggaaa
gagtaa
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