Gossypium raimondii: 105783602
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Entry
105783602 CDS
T04129
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Pathway
gra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105783602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105783602
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105783602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
PilO
P116
Dark_CARD
Motif
Other DBs
NCBI-GeneID:
105783602
NCBI-ProteinID:
XP_012464612
UniProt:
A0A0D2W5R4
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All DBs
Position
13:complement(36160766..36164933)
Genome browser
AA seq
990 aa
AA seq
DB search
MPVPLLQPHNPISFSTSKMLNPSLPVASRTRSRMEAYWSEVCPPSKRRNTRKEVVVQNPS
PIPTKKHSGETQFLYEAPNIDIHRCKQDSRHPANISNLDYNDDEEEEYDDDDDDDEDEDN
DDSMEGSHEALPSPSEEDNDESEDLDYCGEEEEKDVFYINDSTSSGTESKPKSKGKKVGA
ASASSRKLHLLTVEADAILENVDSDSNKVLEVESENNSLPIKFGSWVENTVTPNNADIID
DEMESLWTEMQFCLASDGIASKPSLVEIEDAANVSEVKQDRAALCRQGDHYLVLDEEIGI
KCKFCSFLQLEIKYVASPFMKHPYGKFRSQYSGIVDSSMFDGLQDVDPNIDMPGCDSSAN
VEGTVWEIIPNIKEKLYPHQREGFEFIWNNIAGGIYRDKSKNSSSEGGGCIISHAPGTGK
SLLTIVFLQTYLKENPSCRPVIVAPCSMLLTWEAELSKWKVDIPFHNMNSPDFCGMGKAN
GVALYEKLKVGVPDADRLVRPLVKLLSWKYDGGILVISYNLFTQLAGKETKRKQKCKNLH
KQVSKILLDLPGLLILDEGHIPRNAATLLWKALSGIKTNRRIILSGTPFQNNFDELFNTL
CLVRPTFAEGIRYSNRYKHNSRRGCKGNEAKRNFTSWIGSIRNEIGGLREVRAVIKPFVH
VYKGTILQTALPGLRHTLVVLRPTELQKKILERVEEILKHVQEILERVKEAKNLFKRKRE
KEKKNALDFDRYVSMISIHPSLLKQLLKQLPDQKDINEVVSSIVSNEEIERIRLKPEEGV
KTRFLMNLLKLSEALEERVIVFSQYLGPLRLIMEQLEYHFKWKEGEEILFMHGKCDIKQR
QCSINVFNDPESKARVLLASIKACSEGINLIGGSRVVLLDMTWNPSVERQAICRAYRLGQ
KKVVYVYRLISSVIEGHKFNRQAGKDRVSELLFSSDEHQEQVCDIVEDKVLEEMLQHGTI
KSMFEKIINEPKDSEFIEAFEDQEKVSVPS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcctctactccaacctcacaaccctatttcttttagtacaagcaagatgttg
aatccctccttgccggtggcttctagaacccggagtaggatggaagcctactggtccgag
gtctgtcctccaagcaagcggaggaacaccaggaaggaggtggtggtgcagaaccccagc
cccatacctactaagaaacactccggtgaaacccaattcttgtacgaagcacctaacatt
gacatacaccgctgtaaacaagattccagacaccctgctaatatttccaatcttgattat
aatgatgatgaagaagaagaatatgatgatgatgatgatgatgacgaagacgaagacaat
gatgattcaatggagggttctcatgaggctctcccctctccaagcgaagaagacaatgat
gaatccgaggatttggattactgtggggaagaagaggagaaggacgtcttttatatcaac
gattctacatcttccggtaccgagtctaagcctaaatctaagggtaaaaaagtgggggcg
gcctcggcctcctccaggaaactccaccttcttacagtagaggcggatgctattttggag
aatgtagactcggattcaaataaggtcctcgaagttgaatctgagaacaactctttgcct
atcaagttcggttcttgggttgagaacacagttactcctaacaatgcagatattattgat
gatgaaatggagtcactgtggactgagatgcagttttgtcttgcgtctgatgggattgct
tcaaagccttccttggtggaaattgaggatgccgctaatgtttctgaggttaaacaggac
agagcagccctatgtcgtcaaggggatcattatcttgtgctagatgaagaaattggaata
aaatgcaaattttgctcctttctgcaactggaaatcaaatacgttgcttcaccttttatg
aaacatccttatggaaaatttaggagccaatattctggcattgtggactcctctatgttt
gatggtcttcaagatgtagaccctaacattgatatgcctggttgtgattcctctgccaat
gtcgaaggaacggtatgggaaatcattccaaacataaaggaaaaactttacccccatcag
cgtgaaggttttgaattcatttggaataatatagcagggggaatatatcgtgataagtct
aaaaactcgtccagtgaaggtggaggatgcattatatcacatgctccagggacagggaag
agtctactgactattgtctttcttcagacatacttaaaagagaatccaagttgcaggccg
gtgattgttgctccatgtagtatgttactgacatgggaagcagagttaagtaagtggaag
gttgatattccctttcacaatatgaacagtccggatttttgtggaatgggaaaagcaaat
ggagttgctctttatgagaaacttaaagttggtgtcccggatgcagatagacttgttagg
cctttggtgaaactgctttcctggaaatacgatggaggcattttggtgatcagttacaac
cttttcactcaacttgctggaaaagagacaaagaggaaacaaaaatgtaaaaatctacat
aagcaagtcagcaaaatccttctcgaccttcctggccttctaatccttgatgaaggacac
atacctagaaatgctgctactcttttgtggaaggctttgtctggaattaaaaccaatcgc
cgtatcattctttctggaactcctttccagaataattttgatgagctcttcaacacactc
tgcttagtgagacccacatttgctgaaggaatccggtattctaatcgatacaagcataat
agtaggcgtgggtgcaaaggaaacgaagcaaagcgaaactttacctcttggattggttcc
attagaaatgaaatcgggggactgagggaggttagagctgtgattaagccttttgttcac
gtgtataaaggcacaattctacagactgcacttcccggtttgaggcacactctagttgta
ttacggcccactgaactgcagaagaaaatcctggagcgcgttgaagaaatcctgaagcat
gtacaagaaatcctggagcgtgttaaggaagcaaagaatctgttcaagagaaaaagagag
aaagaaaaaaagaatgcacttgattttgatcgttatgtgtccatgatctcaatccatccc
tcattgttgaagcagctgttgaagcagcttccagaccagaaggatattaatgaagttgta
agctccattgttagcaatgaagagatagaaaggataagactgaaacctgaggaaggagtg
aaaacaagattcctcatgaatctgcttaagcttagtgaagctctggaggaaagggttata
gtttttagtcaatatcttggacctttacgcttaataatggagcagcttgagtatcatttt
aaatggaaggaaggggaggagatattgttcatgcacgggaaatgtgatataaaacagcgt
caatgctccattaatgtgtttaatgatccagagagcaaagcaagggtgttgcttgcatca
ataaaggcttgctctgaaggtataaatcttatcggaggttcaagggtggtgttgcttgat
atgacgtggaacccatccgtggaaagacaagctatatgccgcgcatataggctaggccag
aaaaaggttgtatacgtttaccgacttatctcatccgtgattgaggggcacaaatttaat
cgacaagctggcaaggatcgggtatctgagttattgttctcttctgatgagcatcaggag
caagtctgtgatattgtagaggataaagttttggaagagatgctgcagcatggaacaatc
aagtcaatgtttgaaaagatcattaatgagcccaaagattctgagttcattgaagctttt
gaggatcaagaaaaggtatctgtcccctcgtag
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