Gossypium raimondii: 105783639
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Entry
105783639 CDS
T04129
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03410
Base excision repair
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
gra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105783639
03410 Base excision repair
105783639
03420 Nucleotide excision repair
105783639
03430 Mismatch repair
105783639
03440 Homologous recombination
105783639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105783639
03400 DNA repair and recombination proteins [BR:
gra03400
]
105783639
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105783639
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105783639
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105783639
MMR (mismatch excision repair)
DNA polymerase delta complex
105783639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
105783639
NCBI-ProteinID:
XP_052482726
LinkDB
All DBs
Position
13:complement(44833955..44844189)
Genome browser
AA seq
1101 aa
AA seq
DB search
MNKGGNPRKRPPPPSSHQPSPASKHQATTPTPPPPSTEEDFVDEDVFFDETLMGEEDVES
LILRDFEERQALASRLSKWARPPLSDAYISQSRSIVFQQLEIDYVIGESHKGLLPDSSGQ
AAIIRIFGVTGEGHSVCCLVHGFEPYFYISCPPGMGPDDISHFHQTLEGRMKEMNRNSKV
PKFVRRIELVQKRSIMYYQQQKSQPFLKIVVALPTMVATCRGILDRGIQIDGLGMKSFIT
YESNVLFALRFMIDCNIVGGNWIEIPAGKYKKTAKNMSYCQLEFDCLYSDLISHAPEGEF
SKMAPFRILSFDIECAGRKGHFPEPSHDPVIQVANLVTLQGEDQPFIRNVMTLKSCSPIV
GVDVMSFDTEKEVLLAWREFIREVDPDIIIGYNICKFDLPYLIERAQTLGIAEFPILGRI
RNSRVRVKDTTFSSRQYGTRESKEVTVEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSE
QKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMYVYNYVEMARVTGVPIS
FLLSRGQSIKVLSQLLRKSKQKNLVIPNVKQAGSEQGTFEGATVLEAKAGFYEKPIATLD
FASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPECVNRTPSGETFVKPELQKGILPEILEE
LLAARKRAKADLKEAKDPLEKAVLDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTS
YGRQMIEHTKKLVEDKFTVLGGYEHNAEVIYGDTDSVMVQFGVSDVEAAMNLGREAAEHI
SGTFTKEGEVFCNCLSRNVLHLVIIFCKKRYAGLYWTNPQKFDKMDTKGIETVRRDNCLL
VKNLVTECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA
HVELAERMRKRDPATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLE
NQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALICN
SDRTLCSHCKGREAELYYKTVSQVSELEELFGRLWTQCQECQGSLHQDVLCTSRDCPIFY
RRKKAQKDMVEAKRQLDRWNF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagggcggcaacccacggaagaggccaccaccgccttcttcacaccagccatct
ccggcttcgaagcaccaagcgacgactccgacgcctcccccaccgtcgacggaagaagat
ttcgtcgacgaagatgtcttctttgacgaaacccttatgggggaagaagacgtggaatcc
ctaattctacgcgacttcgaggaacgtcaagctctcgcttctcgtctttccaagtgggct
cgccctcctctctctgatgcctacatttcccagtctcgtagcattgttttccaacaattg
gagattgattatgtgattggagagagtcataaaggtttgctgcctgattcttctggtcaa
gctgccattatccgaattttcggggttactggagaaggacatagcgtttgttgtcttgtt
catggatttgagccgtatttctacattagctgccctccaggaatgggtcccgatgatatc
tcacattttcatcaaacgcttgagggtaggatgaaggagatgaacagaaacagcaaggta
ccgaagtttgttcgacgtattgaattggttcagaaaagaagtattatgtattaccagcaa
caaaagtctcaaccttttctcaagattgtagtggcattgccaacaatggttgctacctgt
cgtggcattcttgatagaggcatacaaattgatggccttggtatgaagagcttcattaca
tatgaaagcaatgttctttttgcactgcgtttcatgattgattgcaatattgttggtggt
aattggattgagataccggctggtaaatataagaagacagcaaagaatatgtcctactgc
caattggagtttgattgcttgtattcagatttgattagccatgcccctgagggggaattc
tcaaagatggctccatttcgcatattgagttttgatatagagtgtgctggtcgcaaaggt
cattttccagagccttctcatgatcctgtaatccaggtagcaaatctagttactttgcaa
ggagaagatcagccattcattcgtaatgtcatgacccttaagtcatgctccccaatagtt
ggtgttgatgtaatgtcttttgatacagaaaaagaagtcttgcttgcttggagggaattt
atccgtgaagtggaccctgatattataattggatataacatttgcaagtttgatttgcca
tatcttattgagagagcacaaacacttggaatagcagagtttccgatacttggccgcatc
aggaatagtagggttcgtgtaaaagatacaacattttcttctagacagtatggaactagg
gagagcaaagaagttactgtggaggggagagttcaatttgatttgctccaggctatgcaa
agggactacaaactaagttcttattcattgaattcagtttcagcacactttctatctgag
cagaaagaggatgttcaccattcaataatatcagatcttcagaatggaaatgctgagact
aggaggcgtcttgctgtctattgtttgaaggatgcttaccttccccaaaggcttttggat
aaactaatgtatgtttacaattatgttgagatggctcgtgtcacaggtgtgcctatatct
tttcttctttctagaggacaaagcatcaaggtactttctcaacttcttaggaagtcgaag
cagaagaaccttgttattccaaatgtcaaacaagcaggatctgaacagggaacgtttgaa
ggtgcaactgtgttggaagcgaaagcaggattctatgaaaagccaattgcaacactggat
tttgcgtctttgtatccatcaattatgatggcatataatttatgctattgcacattggtg
actcctgaagatgttcgcaaactcaacctcccaccagaatgtgttaacagaactccgtct
ggtgaaacatttgttaaaccagagctacagaaggggatacttccagaaatattggaagag
ctattagctgctcgtaaacgagcaaaagctgatttgaaggaagcaaaggatccacttgag
aaagctgttctagatggccgacagctggccttgaaggtaagtgcaaattctgtatatgga
tttacaggagctactgttggtcagttaccatgtttagagatttcttcgagtgttacaagc
tatggtcgccaaatgattgagcacaccaagaagcttgttgaagataaatttacagtgcta
ggaggctatgaacacaatgctgaggttatatatggggacacagattcggtgatggtacaa
tttggtgtgtctgatgtagaagcagcaatgaacttggggagagaagctgcagaacacatc
agtggaacttttacaaaagaaggggaagtgttctgcaactgtctgagccgtaatgtgtta
cacttggttataatattctgcaagaaaagatatgctggtttatattggacaaatccacaa
aagtttgacaaaatggacactaaaggcatcgaaactgttcgaagagacaattgtttattg
gtcaaaaaccttgtaactgaatgcctgcacaaaatactgattgatagagatattcctggt
gcagttcaatatgtcaagaataccatttcagatcttctcatgaatcggatggatttgtca
cttttggttattactaagggtctgacaaaaactggagatgattatgaggtaaaagctgct
catgttgaacttgctgaacgtatgcgcaagcgagatcctgcgactgctccaaatgttggg
gatcgggtgccttatgtcattattaaagctgcaaaaggcgccaaggcttatgagaggtca
gaggacccaatctatgtgctagaaaataacatccccatagatcctcaatattaccttgaa
aatcaaattagcaagccacttttaagaatttttgagcccattttaaagaatgctagcaag
gaacttctccatgggagtcacacaagatccatttccatatcaactccgtcaaacagtgga
ataatgaaatttgcaaagaaacaacttagttgtattggctgcaaagcgctaatttgcaat
tcagatcgaacactctgttcacactgcaagggaagagaggcagaactttattataaaaca
gtttctcaagtgtcagaacttgaggagctttttgggaggctatggacacagtgccaagag
tgtcaaggctctcttcaccaggatgtgctctgcactagtcgggattgtccaatattttac
cggagaaagaaagcacagaaagatatggtagaagccaagcggcagttggaccggtggaac
ttttaa
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integrated database retrieval system
