Gossypium raimondii: 105783742
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Entry
105783742 CDS
T04129
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105783742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105783742
03041 Spliceosome [BR:
gra03041
]
105783742
03032 DNA replication proteins [BR:
gra03032
]
105783742
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105783742
Spliceosome [BR:
gra03041
]
Complex A
U1 snRNP components
Sm proteins
105783742
U2 snRNP components
105783742
Complex B
U1 snRNP components
105783742
U4/U6.U5 tri-snRNP components
105783742
Complex C
U2 snRNP components
105783742
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105783742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
105783742
NCBI-ProteinID:
XP_012464823
UniProt:
A0A0D2M9Q4
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All DBs
Position
1:complement(14653670..14655376)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKSSSLGVGRGRAVAMRAKAQAAGRGT
TAGRGVVPSIRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagtttgggtataccggtgaagctactgcacgaggcgtcgggtcacatcgta
actgtggagctcaagagtggagagctttacagaggaagcatggttgagtgcgaggataac
tggaattgccagctcgagaacatcaccttcactgctaaagatgggaaggtttcacagctt
gagcatgttttcattcgaggcagtaaagtcaggtttatggtcataccagatatgttgaag
aatgctcctatgttcaaacgtctagatgctaaaatcaagggcaagagttcatctcttgga
gttggcagaggtagagctgttgcaatgcgagccaaagctcaagctgctggccgtggcaca
acagctgggagaggtgttgtgccatctattcgtaggtaa
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