Gossypium raimondii: 105783788
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Entry
105783788 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105783788
04121 Ubiquitin system [BR:
gra04121
]
105783788
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105783788
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105783788
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105783788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_10
zf-HC5HC2H
GAS2
Motif
Other DBs
NCBI-GeneID:
105783788
NCBI-ProteinID:
XP_012464884
UniProt:
A0A0D2W7H0
LinkDB
All DBs
Position
13:50471461..50472856
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AA seq
338 aa
AA seq
DB search
MGDRMLVGRYWCYICSQMVNPTMEPEIKCPFCESGFVEEITSVTPYSNNNNGGNDSAGST
NNLLLWGPILLGLIGGLGSSQLRITGRAQINDGNDGMDDELGREFESLVTRGRRRTLGPG
IRILQDIRTESENAENEGSDRGGRMILFDPFNDEALIVQGSFGFNHGQSSNPRATISFSD
YLMGPGWDLLLQYLADNDPNRHGNPPAKKEAVKAMPNVTIDDNLQCCVCLENIEIGSQAK
EMPCKHKFHGGCITPWLDLHSSCPICRFRLPSDEEKLDENGTGQSSGRVGNRRRYWIPIP
WPSEGLLTLSGSSQNAASSSASLEAMPGSSSAAQTEDN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggggataggatgctagtaggtagatattggtgttacatttgttctcagatggtgaat
ccaacaatggaacctgagatcaaatgcccattttgtgaatctggatttgttgaagaaatc
accagcgtaacaccttactccaacaacaacaatggcggaaacgattcagcaggctcaacc
aacaatcttttactttggggtccaatcttgcttggcttgattggtggtttaggttcttca
cagttgcgtatcacaggcagggcccaaatcaatgatggcaatgatggcatggatgacgaa
cttggtagagagtttgaatccttggttactaggggaaggaggaggactttgggtccaggt
attcggatacttcaagatattcgaaccgaatcggagaatgcagagaacgaaggttccgat
cgaggcggtcgaatgatcttattcgatccgtttaatgacgaggcattgattgttcaaggc
tcatttggtttcaaccatggacaaagctcaaatccaagggcaaccatttcatttagtgat
tacttaatgggacctggttgggatcttttgttacagtatttagcagacaatgatccgaac
cgccatgggaacccaccagcaaagaaagaagcagtgaaagcaatgccaaatgtgaccata
gatgacaatctacaatgttgtgtgtgcttggaaaatattgagattggaagtcaagcaaaa
gagatgccatgtaaacataaattccatggtggatgcattactccgtggttggaccttcat
agctcttgccccatttgccgcttccggctgccttctgacgaagaaaagctggacgagaat
ggcaccggccaaagtagtggaagggtggggaacagaagaaggtattggataccaattcca
tggccttctgagggtttattaacattgtcaggttcatctcaaaatgctgcttcttcaagt
gcttcattggaagccatgcctggaagttcaagtgcagctcaaacagaggataattga
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