KEGG   Gossypium raimondii: 105783805
Entry
105783805         CDS       T04129                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gra03400]
    105783805
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105783805
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 105783805
NCBI-ProteinID: XP_012464914
UniProt: A0A0D2U788
LinkDB
Position
13:complement(57858354..57866708)
AA seq 1037 aa
MGGNKVLEDLISTVRLIVGSDYSEMDIIRALHLAKHDATAAINIIFDSPRSFKPREKQIE
PESEPVVRISSSDTSTVSVKPKKTGKENKDCSFSSNGNVACGGSVLEDEGNVRLENDWWF
VGSSEVPGLSTSKGRKIKVGEEVSFTFPLKGTGSSPAGSMGKGFGKGRAAAACSEIVRFS
TKNFGEIGRIPNEWARCLLPLVRDKKIRVEGRCKSAPDVLGVMDTVLLSLSVYINSSTFH
KYQQTSLKAASNCNDESIVHPLPSLFRLLGLTPFKKAELAPGDLYTKKRPLETKDGSGIH
TPLLTANKFKNPSQNGNEVENDESISDADLENIVGVGDNSELEEMDPPSTLQCELRPYQK
QALQWMFQVEKGNCMDEAATTLHPCWEAYRLADKRDPVIYLNAFTGDATIEFPSTHQMAR
GGILADAMGLGKTIMTISLLATHSERGGLSDSQSSDQPSDQGGEAIDVFGQSPNSVKTAT
KFPSFDKLSKQRNKLANGGNLIICPMTLLGQWKAEIETHVQPGSLSLYVHYGQSRPKDAK
LLAQNDVVITTYGVLASEFSAENSEDNGGLYSVRWFRIVLDEAHTIKSSKSQISMAAAAL
VADRRWCLTGTPIQNKLEDLYSLLRFLKVEPWGNWPWWNKLIQKPFEEGDQRGLKLVQSI
LKPIMLRRTKCSTDRYGKPILVLPPADVQVIYCELSEAEKDFYEALFKRSKVKFDQFVEQ
GRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYTDLNKLAKRFLRGGQSTLDGEAKD
LPSRAYVQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNPNSGLCPV
CRKTVTKQELITAPTESRFQVDVEKNWVESTKVVVLLQELENLRSSGSKSILFSQWTAFL
DLLQIPLSRNNIPFLRLDGTLNQQQREKVIKQFSEDSKIMVLLMSLKAGGVGINLTAASN
AFVLDPWWNPAVEEQAVMRIHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQKMISGALT
DEEVRTARLEELKMLFT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgggtggaaacaaggtgttggaggatcttatttccaccgtccgattgatcgttggatcg
gattattccgagatggacataattagagcgcttcacttggccaaacacgatgcgaccgct
gccatcaacataatttttgattcgcctcgaagtttcaagcccagggagaaacaaattgaa
cccgaatccgaacccgtggtccgaatttcgagctccgatacatcaacggttagcgtaaag
cccaagaaaacagggaaagagaacaaggattgtagttttagtagtaatggaaatgttgca
tgtggtgggagtgttttggaagatgaaggaaatgttaggcttgaaaacgattggtggttt
gttggttccagcgaggtacctgggctttcgacgagtaaaggaaggaaaattaaggttggg
gaggaagttagcttcacgtttccgttgaagggtactggctctagtccggctggatcaatg
gggaaaggctttgggaaaggaagagcagctgcagcttgttcagagattgttagattctct
acaaagaactttggggagattggtagaatacccaatgaatgggcacgctgtctgttgccg
cttgtgagggataagaagattagagttgagggaaggtgtaaatcagctccggatgtgttg
ggtgtaatggatactgttctcttatcgttaagtgtgtatattaatagttccacgttccat
aagtatcagcaaacttcactcaaggcagcaagcaattgcaatgatgaatctattgttcat
cctcttccaagtttgttccggttgcttggcctaacaccttttaagaaggcagaactagct
cctggtgatttgtacacaaagaaacgacctttggagacaaaggatggttctggtattcat
accccattattaactgcaaacaaatttaagaatccatctcaaaacggaaatgaggttgaa
aatgatgagtcaatctctgatgctgatcttgaaaatattgttggtgtgggagacaactct
gaattagaggaaatggaccctcctagcaccctccagtgtgaacttcggccttatcaaaag
caggctctccagtggatgtttcaggtggagaagggaaattgcatggatgaggcagcaaca
acactgcacccttgctgggaagcatatcgcttagcagataagagagatcctgttatctac
ttgaatgcatttactggtgatgctacaatagaattcccaagcactcatcaaatggccaga
ggaggaatcttggcagatgctatggggcttgggaagaccatcatgactatatccctctta
gcaacccattcagaaagaggtgggctatcagatagtcaatcctcagatcagccttctgat
caaggtggtgaagccattgatgtattcggccaatcaccgaattctgtgaaaactgcaacg
aagtttcccagctttgataagttgtcaaagcaaaggaacaaacttgctaatggtggcaat
ctgattatatgtcccatgactcttcttggccaatggaaggcagagattgaaactcatgtg
cagcctggatctttgtctctatatgttcattatggtcaaagtcggccaaaggatgcaaaa
cttcttgcccagaatgatgttgtaatcactacatatggggttctagcttcagagttttca
gcagagaactctgaagataatggaggactgtactcggtgcgttggttcaggattgttctt
gatgaagcacataccataaaatcctcaaaaagtcaaatttccatggctgcagctgcttta
gttgctgatcgtcgctggtgtctcactgggactccgatccagaacaagctggaggatcta
tacagtctcctccgctttttgaaggtggaaccttggggaaactggccctggtggaacaag
ctcattcaaaaaccatttgaggaaggtgatcagagagggctaaagttggttcagtcaatc
ttaaagccaatcatgttaaggagaacaaaatgtagcacagaccgatatggcaagccgatt
ctagtgctacctccagccgatgttcaggtgatatactgtgagctcagtgaagctgaaaag
gacttctatgaagccctatttaaaagatcgaaggtgaagtttgatcagtttgttgaacaa
ggtcgtgttcttcataattatgcttctattttggagttacttctacgtctacgtcaatgt
tgtgatcatccgtttcttgtgatgagccgaggagatacacaagaatacacagatcttaat
aagctagctaaacggttccttagaggcgggcagagtactctagatggtgaagccaaggat
ctaccttcaagggcatatgtccaggaagtggttgaagagctgcggaagggagaacaagga
gagtgtccgatatgtcttgaagcatttgaagacgctgtactgactccatgtgctcaccgc
ttatgccgcgagtgtctcctggcaagttggcggaatccaaattctggtttatgccctgtt
tgtaggaaaactgttacgaagcaagaacttattacagccccaactgagagtcggtttcag
gttgatgttgagaaaaattgggtggagtccaccaaggtggttgttctattacaagaactt
gaaaatcttcgctcatcaggctctaagagcattctcttcagccagtggactgcatttttg
gacctcttgcagattcctctttctcggaataacattccgtttcttagactcgatgggact
ttgaatcaacagcaacgcgaaaaagtaataaaacagttttcagaagatagcaaaatcatg
gtgttgctaatgtcactcaaagctggtggggtgggaataaatctaactgcagcttccaat
gcctttgttttggatccatggtggaatccggctgtagaagaacaagctgtgatgcgcatt
catcgtatcggccaaactaaaagggtagcaatcaaacggttcattgtcaagggaacagta
gaggaaaggatggaagcagtacaagcacgcaagcagaagatgatatctggtgccttaacc
gatgaagaagttcgaacagcacgtcttgaagaactcaaaatgcttttcacttaa

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