KEGG   Gossypium raimondii: 105783884
Entry
105783884         CDS       T04129                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
gra  Gossypium raimondii
Pathway
gra03030  DNA replication
gra03410  Base excision repair
gra03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105783884
   03410 Base excision repair
    105783884
   03450 Non-homologous end-joining
    105783884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gra03032]
    105783884
   03400 DNA repair and recombination proteins [BR:gra03400]
    105783884
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gra04147]
    105783884
DNA replication proteins [BR:gra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    105783884
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     105783884
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     105783884
Exosome [BR:gra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105783884
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 105783884
NCBI-ProteinID: XP_012465034
UniProt: A0A0D2SDF2
LinkDB
Position
13:35553071..35556826
AA seq 414 aa
MGIKGLTKLLADNAPNAMKEQKLESYIGRKIAIDASMSIYQFLIVVGRRGTEMLTNEAGE
VTSHLQGMFTRTIRLLEAGMEPIYVFDGHPPDLKKKVLVKRYSKRANATEYLQQAMETGN
KDDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED
MDSLTFGAPRFLRHLMGPGSRKVRVLEFEVGKVLEELNLTMDQFIDLCILSGCDYCESIR
GIGGQTALKLIRQQGSIEHILQNINKERYPIPDDWPYEEARYLFKEPLVCTNIEQFEMKR
SAPDDEGLITFLVTENGFNSDRVTKAIEKIKAAKNKSSQGRLESFSKSVANTSIRIKTKA
TKSMLQFPKSMFNSKIFSPQDSICSRPKGFSTMAPLCLHFKHSMVFSRGVCYGI
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgggcattaagggtttaacgaagcttctagcagacaatgcaccaaatgcaatgaaggaa
cagaaactcgagagctatatcggtcgcaagattgccatcgatgccagcatgagtatttac
cagtttctcatagtggtcggccgtaggggcactgaaatgcttactaatgaggctggcgaa
gttaccagtcatctgcaaggcatgtttactcgcacaattcgacttcttgaagccggaatg
gaacctatctacgtttttgatggacatccacctgatttgaagaaaaaagtgctagtaaaa
cgttactcgaaaagggcaaatgctaccgagtatttgcagcaagccatggagactggcaat
aaggacgacattgaaaagttcagcaaacggactgtaaaagtcacaaagcagcacaatgaa
gactgcaaacggctattaagacttatgggggtgcctgtgattgaggctccttcagaagca
gaggcccaatgtgctgcactttgcaaatcaggaaaggtttacgctgttgcttctgaggat
atggactctttaacatttggagctcctagatttcttcgccatttaatgggccctggctca
agaaaagttcgggtcttggagtttgaagttggaaaggttttagaggagctgaatctcacc
atggatcaattcattgacttgtgcatcctttctggatgtgattattgtgagagcattcgt
ggtattgggggacaaacagctttgaagctaattcgtcaacaagggtctatagagcatata
cttcagaacataaacaaagagaggtacccgattcctgatgattggccatatgaggaggct
cgatatctttttaaagaaccattagtctgcaccaatattgagcaatttgagatgaagcgg
agtgctccagatgatgaagggctgattacctttctggtgactgaaaatgggttcaatagt
gacagagtgacaaaggcaatagaaaaaattaaagcagccaagaacaagtcatcacagggc
cggttagagtcattttctaagtcagttgctaacacatctatacgaattaaaacgaaggca
accaagtccatgcttcaatttcccaaatcgatgttcaactctaagatattctctccacaa
gacagtatctgttccaggcccaagggtttcagcaccatggcaccactgtgtttgcatttc
aagcactccatggtattttctagaggtgtctgctatggcatatga

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