Gossypium raimondii: 105783888
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Entry
105783888 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105783888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105783888
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105783888
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105783888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
105783888
NCBI-ProteinID:
XP_012465045
UniProt:
A0A0D2V8W6
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All DBs
Position
13:402284..405235
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AA seq
308 aa
AA seq
DB search
MAPGGGICKDVIESRITFAEYDMATSSAELRGSPLRKAATSLGGNLGATSTNDVHELLEC
PVCLNLMYPPIYQCPNGHTVCSICKARVHNSCPTCRNELGNIRCLALEKVAESLELPCRY
QILGCHDIFPYYSKLKHEKNCRYRPYHCPYAGAECSVTGDIPFLVVHLKNDHKVDMHDGC
TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEAR
QFSYSLEVGCYGRKVTWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacctggtggtggtatctgcaaggatgtgatcgagtctcgtattacatttgcagaa
tatgacatggcaacttcaagtgcagagttaagaggttcccctttaagaaaagcagcaacc
agtttgggtggaaatcttggagcaacatcaacaaatgacgtgcacgaattactcgagtgt
cccgtttgcttaaatttgatgtatcctccgatttaccagtgtcccaatggccacactgta
tgttcgatttgcaaggctagagttcataattcttgcccgacttgccgcaatgagcttgga
aatataaggtgtttggctctagaaaaagtagcggagtcattagaacttccttgccgatac
cagattctgggttgtcacgatatttttccgtactacagtaagctgaagcacgaaaaaaac
tgtagataccgcccctatcattgtccgtacgccggagccgaatgctccgtcactggtgat
attccgtttctcgtcgtgcatctaaagaatgatcacaaggtcgatatgcatgatggttgt
actttcaaccacagatacgttaaatccaatcctcatgaagtcgaaaatgccacctggatg
ttaaccgttttcaactgtttcggtcgacaattttgcttgcacttcgaggcttttcacata
ggaatggcaccagtttacatggctttcttacgattcatgggtgacgaggatgaggcgaga
caattcagttatagtttggaagttggttgttatggcagaaaggttacctggcaaggagtt
cctagaagcattcgagatagtcatcggaaagttcgagatagtcaagacggacttataatt
caacggaacctggcgctctttttttctggcggggatagacaggaattgaagctgaaagtg
gccggccggatttggaaagaacaatga
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