Gossypium raimondii: 105783943
Help
Entry
105783943 CDS
T04129
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105783943
04121 Ubiquitin system [BR:
gra04121
]
105783943
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105783943
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105783943
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105783943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Zn_ribbon_RPAB4
zf-RING_5
FAR1_N
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
DUF7129
Motif
Other DBs
NCBI-GeneID:
105783943
NCBI-ProteinID:
XP_012465112
UniProt:
A0A0D2V9D7
LinkDB
All DBs
Position
13:complement(1574014..1575527)
Genome browser
AA seq
362 aa
AA seq
DB search
MAATTSYWCYQCNQFFLISNEDPITCPDCDGGFIEEIDNMPHAARALHADSRLVGGDGFT
AMYNSSTTLRRSRMNGGDRSPFNPVIVLASPSGESTNVEQSGRGFELYYDDGGGLGLRPL
PASMSEFLLGPGFDRLIEQLSQMEIQNIGRHNQPPASKAAVEAMPMVEIDDTHIHNELFC
AVCKEQFELGTKVLNMPCNHLYHSNCLLPWLRLRNSCPVCRHELPAAKGEEGDGSSNSLD
ETPMGLTIWRLPGGGFAVGRFSAGENREFPVVYTEMDGGFSGGGSVPRRVSWGSVGRERG
GYLRRVLRNMFGCFSGSSSSPRLDSRIRRSSRSFSLFSPPSRRRGWALELDNARSRSRRR
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgacgtcgtattggtgttaccaatgcaatcagttcttcttgatttccaac
gaagatccgattacttgccccgactgtgacggcggattcatcgaagagatcgataacatg
cctcatgcagcgcgtgctctccacgctgactcccgtctcgtcggcggcgatggattcacc
gcgatgtacaatagctcaactacccttcgtcgaagccggatgaacggtggcgatcgttct
ccttttaatcccgtcatcgtcttggcgtcaccttccggggaaagtacaaatgttgaacag
agtgggagggggtttgagctttattatgacgacggaggtggattgggtttgcggccttta
ccggcgagcatgtcggagtttctgttaggtcctgggtttgaccggttaattgagcagtta
tcacaaatggaaatccaaaacattgggcgtcacaaccaaccgccggcgtcgaaagcggcg
gttgaggcaatgccaatggtggaaatagacgatacccatatccataacgaactgttctgt
gcggtatgtaaagaacaattcgagttaggaaccaaagttttaaacatgccttgtaaccat
ttgtaccattcaaactgtttactcccttggcttcggttgcgaaattcatgccccgtttgc
cgccatgaattgccggcagctaaaggggaagaaggggacgggagttcaaattcattggat
gagacccccatggggttgaccatttggagattaccgggtggtgggttcgcggtggggagg
ttttcagctggagagaatagagagtttcccgttgtttatacggaaatggatggtggtttt
agcggcggagggtcggtgccgcggagggtttcatgggggagtgtagggagggaaagagga
gggtatcttagaagggtgttgcggaatatgtttgggtgttttagtggttcaagttcttct
cctaggttggattcaaggataaggagaagtagtagatccttttccctttttagtcctcct
tcaaggagaagaggttgggctcttgaacttgataatgcaagatctagaagtaggagaaga
agaaggtaa
DBGET
integrated database retrieval system
