Gossypium raimondii: 105784458
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Entry
105784458 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105784458
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105784458
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105784458
NCBI-ProteinID:
XP_012465800
UniProt:
A0A0D2VAU0
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Position
13:10068324..10069438
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AA seq
303 aa
AA seq
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MGFAGYSYSWFLLSFFALIPTLRAHIAEYDEYWKARELEAIENLNKAYHPNPEEVVRHYN
DHFVNTMLEYNNTRRVLKGKKNGPCEITNPVDSCWRCDPNWVKNRKRLADCAPGFARGTT
GGKDGKFYVVTDPNDDIANPKPGTLRHAVTQLRPLWITFKKSMIIKXQTELIVTSDKTID
XKGANVHICYGAGIIVRFSRNVIIHGLHIHHIKPATGGIIRDAENHIGLRTASDGDAISL
FGATNIWLDHLSLYDSSDGLIDVIQGSTAITISNCHFTDHNEVLLFEQATTTLSTRRCRS
SLL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgctggttatagttatagttggtttttgttgtcatttttcgccctaatccca
acactaagagctcacatcgctgaatatgatgagtattggaaggcacgagaattggaagcc
attgagaacctgaacaaggcttatcaccccaatccggaggaggtggtccggcattacaat
gaccactttgtcaataccatgcttgagtataataacaccagaagggtgttgaaaggaaag
aaaaacggtccctgtgagattactaaccccgttgatagttgttggcgatgtgatcctaac
tgggtaaagaacaggaagaggttggccgactgtgcccctggatttgctcgtggtactacc
ggtggaaaggacggcaagttttacgtggtcactgaccctaatgatgatattgctaacccc
aagcccggaactttacgtcatgcagtcactcaactcaggccactttggatcactttcaaa
aaatccatgatcatcaagnntcaaacagagctcattgttacaagcgacaagaccattgat
ngcaagggagctaatgtgcatatttgctatggtgctggtattatcgtccgcttttctagg
aatgtcattatccatggcctccatatccatcacattaaacccgctactggtggcatcatt
agggatgctgaaaaccacattgggttaaggactgccagcgatggagatgcgatctctctt
tttggagcaaccaatatttggcttgaccatctttccctttatgattcctctgatggtctt
atcgatgttattcagggttccactgccattaccatttcaaactgccatttcactgaccac
aacgaggtgctattgtttgagcaagcgacaaccacgctgtcgacgagaagatgcagatca
tcgttgctttga
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