Gossypium raimondii: 105784888
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Entry
105784888 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gra
Gossypium raimondii
Pathway
gra00531
Glycosaminoglycan degradation
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105784888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gra00536
]
105784888
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
105784888
Glycosaminoglycan binding proteins [BR:
gra00536
]
Heparan sulfate / Heparin
Enzymes
105784888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
105784888
NCBI-ProteinID:
XP_052477893
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Position
10:complement(60959901..60962160)
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AA seq
521 aa
AA seq
DB search
MMNFKSITFFVVLLSCLLVSKAEKVEVVVEGATPIAQTDEDFICVTLDWWPTNKCDYDQC
PWGQAGLFNLDLKNKILEKAVKAFHPLRIRVGGSLQDQVVYNVRNNIENCQPFQKQDKGF
LFGFSIGCLDMKRWDELNEFFNQTRAKVTFGLNALIGRKESETEKTLWVGDWYSHNARDL
MSYTISKGYKIDSYELGNELCGVGVSARIEAKQYAKDMATLKNLVKEMYPNPKTQPKVLG
PGGFYDKKWFDTFLDASGHDVIDGVTHHIYNLGPGNNPNVVHRVQDPFFLTQIAQTFKDV
SNAIDKFAPWSGAWVSESGGAYNSGGQLVSYTFAFGFWYLDQLGMTSVYNHKVYCRQALT
XGNYALLNTTTFVPNPDYYGALLWHRVMGSKVLSVMHKGSPYLRVYSHCAKKEAGVSFVF
INLSKNTSFEIDLFHDLNLNGGSPNFEFKGHKKREEYHLIPKDGNILSSIVLLNGTPLEL
SDSLEIPELKPKLVDGLKPISIATHSIAFVTIRDFNAPACS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcaaaagtattacgttttttgttgtgcttttgtcatgtcttttggtctca
aaggccgaaaaagttgaagttgtggttgaaggagcaactcctattgctcaaaccgatgaa
gattttatttgtgttacccttgattggtggcctacaaacaagtgtgattatgatcaatgt
ccgtggggtcaagctggactttttaatttggatttgaagaacaagattcttgaaaaggct
gtaaaagcatttcatcctttgagaattagagttggaggttcgttgcaagatcaagtggtg
tacaacgttcgaaataatattgagaattgccaaccattccaaaaacaagacaagggcttc
ttattcggtttctccattggatgtcttgacatgaagagatgggatgaactcaatgagttt
ttcaatcaaactcgagctaaagttacatttggtttaaatgctcttattggaagaaaagag
tccgaaactgaaaagactctttgggttggtgattggtattcacataatgctcgggatctc
atgagttatacaatttccaaaggatataaaattgactcttatgaattaggaaatgaattg
tgtggagttggagttagtgctaggattgaagctaaacaatatgcaaaagatatggcaaca
cttaaaaatcttgtaaaagagatgtatccaaatccaaaaactcaacctaaggttttgggc
ccgggaggtttctatgacaagaaatggttcgatacttttttggatgcttcaggacatgac
gttattgatggagttacacatcatatttataatctcggacccggtaataacccaaatgtg
gttcatcgtgtccaagatccatttttcttgactcaaattgctcagacatttaaagatgtt
tcaaatgctattgacaaatttgcaccatggtctggtgcatgggttagtgaatcgggtgga
gcttataatagtggtggccaattagtgtcgtatacatttgcatttggcttttggtacttg
gaccaattgggaatgacatctgtttataaccacaaagtttattgcagacaagctttgacc
nggggcaattatgctcttcttaatactaccacatttgttcccaatccagattattacggt
gcacttttgtggcatagagttatggggagtaaagttctttctgtcatgcataagggttct
ccatatttgcgtgtatactctcattgtgccaaaaaggaggccggggtttcttttgttttc
atcaacttatcgaaaaatacctcatttgaaattgatcttttccatgatctaaatttaaat
ggtgggagtccaaattttgaatttaaaggacataaaaagcgagaagagtatcatttgatt
ccaaaagatgggaacatcttaagcagtattgtattgctgaacggaacaccactggaactt
tcagactcgttggagataccagagttaaagccgaagcttgtggatggtttgaaacccatt
agcatcgctactcattcaatcgcattcgtaaccataagagatttcaatgcacctgcatgt
tcttaa
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