Gossypium raimondii: 105785358
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Entry
105785358 CDS
T04129
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105785358
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105785358
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
105785358
NCBI-ProteinID:
XP_052482659
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Position
13:24865391..24886659
Genome browser
AA seq
1205 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPGNEIFQGNYVDNHISSREQITLQDTMGDVVYSTSQFGLDERFGEGDTSQIGLLDEELV
LDRVAVPGSVEVSEYDLQGSDVPQKASNLEAVPMVCSGDQDEDLATNSEFVENDQDVGTP
GLMELPNMSGDHKVLADHMESEHHNLTELGNECVENASNKSNSLYGDTGPVDQSLHNDVD
HDAVPPKNGCHFGDMEKEQTKPPGNSVHDALCVEYTSAVGNVRGSDGLDRVEDMQNGVMH
SIDRTEGECAESPSCSNITFDLEDPSRRTCLSSICVPTSDGCLENGQASHKSENGNDAET
TDNLEEPFSPAKAIASNPSCPLELPSRPTVIDGEAQASLEPNDSENPETPIVHENLSSVQ
VLGSDSLAAAEQNLVDLSRREEEVHASGASIEVQVEACQTQSLEPALCDDQLENSNNCAM
SDLPAPEKLLSAPEGPLDKPSDLLGESTPDKEVLAENDDIDSGTKLISGKKRSIAESTLT
IESMNSVESFGRPRSMRTAESVPDDDDLLSSILVGRRSSVFKMKPTPPLEVASMKRARSA
PRSSTIKRKVLMDDTMVLHGDTIREQLVNTEDIRRIRKKAPCTRPEISLIQGKFLEDEIF
SEPIFTGISGDLACLHSKPYDLSSVRISEGEEFHASSELAKNLECSVRPRIGEAGIEVSS
VPVIHGNDEQTQSAAIPNQADTQQGEYSDLNAQQDRYAIDDVPQLLQHEPLNGITEMEID
KDNVEVATLANCSVLNELGVSSHADLDTGGTSNKTVEEVTNAIDGSMLNIATCLPPDQKM
TTQPGEDASELDLRNDKGTNPTEVLEHDVESIIAAETESKAADELLEESKANTSVEVSVA
DCPEPIENGYDSLAAIHTGEFVNGAQNAYETGYGKIDVADEAQVEGSFLDNEHKDSIFKG
SEESKLDSTYSEKVDMALKNASLIDGETPIFLEVDAVNEEMISLADNRTAYEDVAVANDT
EFLNVDDNELGGDEDDEGMPCGNESRLLENSGWSSRTRAVAKYLQNLFEDEVIHGHKVLS
MDSLLARKTQKEASRMFFETLVIPLFLKYLFFQEHASPLKQSPFIQEPVKHLSHFWVDYK
IYLDF
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagttcatattggcgaagaaaggtccgttggggacaatatggattgca
gcacatctggagaggaagctccgaaagaatcaggtggccgatactgatatcggtgtctct
gttgactctattctatttcctgaagtaccgattgcactacgattgtccagtcatcttctt
cttggagtagtgaggatatattcccgaaaggtgaattacctttttgatgattgcagcgaa
gcgttgcttaagataaagcaggcatttcgctccactgcagttgatttaccaccagaagaa
tcgactgcgccctaccattcaatcactttgcccgagacttttgatcttgatgactttgag
ctgcccggcaatgagatttttcagggtaactatgttgataatcacattagctcaagagag
cagattacacttcaagataccatgggcgacgtggtttactctacatcacaatttggattg
gatgagcggtttggtgagggtgacacttctcagattggtctgcttgatgaggaactagtc
ctagatcgggttgcagtgccaggatctgttgaagtttctgagtatgatcttcagggctca
gatgtaccacagaaagcgagtaatttagaagctgtgcctatggtttgcagtggggatcag
gatgaagatctagctacaaattctgaatttgtcgagaacgatcaagatgttggtactcct
ggattaatggaattgcctaatatgtctggtgatcacaaggtattggctgatcatatggaa
tcagaacatcacaatcttacggaattgggcaatgagtgtgtagaaaatgcttctaataaa
tcaaattctctctatggggatactggtccagtggatcagtctttgcacaatgatgtagat
catgatgctgtgcctcctaaaaatggttgccattttggtgacatggagaaagaacaaact
aaaccaccaggaaattctgtccatgatgccttgtgtgttgagtacacatctgctgttggt
aatgtcagaggatctgatggcttggatagggtggaagatatgcagaatggtgttatgcac
tcaattgatagaactgagggagaatgtgcagaatctcctagctgctccaatatcaccttt
gacttggaggatccttctcgaagaacatgtttaagtagcatctgtgtgcccacatcagat
ggctgtttggagaatggccaagcatcgcataaatctgaaaatggaaatgatgctgaaacc
actgataatttggaagagccattctctcctgccaaagcaatagcttcaaatccttcctgt
cccctggagttgcccagtaggccaacagttattgatggtgaagctcaagcttctctggaa
ccaaatgattctgaaaatcctgaaacacctattgttcatgaaaatctgtcatctgttcaa
gttcttggaagtgatagtctggctgctgcagagcaaaacttggtggatttgtccagaagg
gaggaggaagttcatgcttctggagcttcaattgaggtgcaagttgaagcctgccaaact
cagagtttggaacctgctttatgtgatgatcagttggaaaattcaaataattgtgctatg
tctgatttgcctgcacctgaaaagttactctctgcacccgaaggacctcttgataaacca
agtgatttgctgggagagtctaccccagacaaagaagtcctagcagagaatgatgatatt
gatagtggaaccaagctcatttcaggaaaaaaacgaagtatagctgaaagtacattaacc
atagagagtatgaactcagttgaatcatttggaaggcctagatccatgagaactgcagaa
tcggttcctgatgatgatgacttattgtcttctattttagttggaagaagatcttctgtt
ttcaaaatgaaaccaacacctcctcttgaagtagcatccatgaaacgtgcacgatctgca
ccaagatctagtaccatcaagagaaaagtgcttatggatgataccatggttttacatggc
gatacaatacgggagcagttggttaatactgaagacatacgtcgcatacgcaagaaagcc
ccttgcactcgccctgaaatttcattgattcagggaaaattcttggaagatgagatcttt
agtgaacctatatttactggtatctcaggtgacttggcatgtttgcacagtaaaccatat
gatctaagcagtgtcaggatttctgaaggtgaggaattccatgcatcatctgaactagct
aagaatttggagtgttctgtcagacctcgtattggtgaagctggaatcgaagtaagctct
gtgcctgtgattcatgggaatgatgagcaaacacaatctgctgctattcctaatcaggct
gatactcagcagggtgaatacagtgatcttaatgctcagcaggatagatatgctattgat
gatgtacctcaacttttgcaacatgaacctttgaatgggatcactgaaatggaaattgac
aaagataatgttgaagttgctactctagcaaattgttctgttctgaatgagttaggggta
tcatcacatgctgatcttgatactggaggtactagtaacaagacagttgaggaggtaacc
aacgccattgatggctccatgttaaacattgcaacatgccttccacctgatcaaaaaatg
actactcaacctggagaggatgcttctgaattggatttgagaaatgacaaaggaacgaat
ccaactgaagttttagaacacgatgttgaaagtatcattgcagctgaaactgaatcaaaa
gcagctgatgagttgttagaagaaagtaaagccaatacttcagttgaggtcagtgtagca
gactgccctgaaccaattgaaaatggatatgattctcttgcagctatacacactggtgag
tttgtgaatggcgctcaaaatgcctatgaaactggatacggtaagattgatgtagcagat
gaggctcaagttgagggttctttcttggataatgaacacaaagacagtatcttcaagggt
agcgaagaaagtaaactggattctacatattcagagaaggttgatatggctctgaaaaat
gcttcgttaattgacggagaaactccaatctttctggaagttgatgcagtcaatgaagaa
atgatctctcttgcagataatcgtactgcatacgaggatgttgctgttgcaaatgacaca
gaatttctgaatgtagatgataacgagctaggtggtgatgaagatgatgaaggcatgcct
tgtggcaatgaaagtcgtcttcttgaaaacagtggatggtcttctcgtaccagggctgtt
gccaagtatctccagaatttatttgaggacgaagttatacatggacataaggtactttca
atggatagtctattggctcgtaaaacacaaaaagaagcatcgaggatgttttttgaaaca
ctggtgattcccttgtttctcaagtacttgttttttcaagagcacgcatctcctctaaaa
cagtctccttttattcaggaacctgtaaagcatctttcacatttttgggtagattacaag
atttacttggacttttga
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