Gossypium raimondii: 105785379
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Entry
105785379 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105785379
KO
K13091
RNA-binding protein 23/39
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105785379
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
General mRNP proteins
105785379
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
105785379
NCBI-ProteinID:
XP_012466906
UniProt:
A0A0D2QD97
LinkDB
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Position
11:25178697..25185600
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AA seq
618 aa
AA seq
DB search
MDFDEYEYLEKTVEEQEDPKKTKDGGGSEDKSEKSYRKRDGDREEEDDEGKRSSKKSRSG
RDEDDEERRDRDKDRHRSSRDRDRERERDRDKDLERRGSRERDSREREKERERERREKDK
EKERDRREKEKERERREREKEKEKEREIDRRERSSSRSRRHESDREIERERERDRRERSS
SRSRRHESDRELERERERDRRERSSSRLRRHESERDQEREREIDIRDSRRFKDKKDAVEP
EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV
MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGAGAGGVAGPYGAVDRKLYVGNLH
FNMTEMQLRQIFEPFGPVELVQLPLDLETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV
GRTIKVSSVTDHVVTQDATAKSADFDDDEGGGLALNAQSRALLMQKLDRSGIATSITSSL
GVPLVNGSAPNQQATLPVNGQGAFPAPVLQPIMSTTALEPIGQPSECLLLKNMFDPATET
EPDFDLDIKEDVEEECSKYGRVKHIYVDKNSGGCVYLRFDSTEAAGKAQRAMHMRWFAGR
SISALFMQPHEYEARFKG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtatttggaaaaaaccgttgaggagcaggaagatccgaag
aagacgaaagacggaggaggatcggaggataaaagcgagaaaagctataggaagagagat
ggagatagagaggaagaggatgatgagggcaagaggagcagcaagaaatcgagaagcggc
cgcgatgaggacgacgaggagaggcgagatcgggataaggaccgccatagaagcagccgc
gacagggatagggaaagggagagagatagagataaggatttagagaggaggggtagcaga
gagagggatagcagagagagggagaaggaaagggagagagaaagaagagaaaaagataag
gagaaagagagggataggagagagaaggaaaaggagagagagaggagggaaagagagaag
gaaaaggagaaagagagggagatagaccggagagagagaagcagtagtaggtcgaggagg
cacgaaagtgatcgtgagatagagagggaacgggagagagataggagagagaggagcagt
agtaggtcgaggaggcacgagagtgatcgtgagctagagagggagcgggagagagatagg
agagagagaagcagtagtaggttgaggagacacgagagtgaacgcgatcaagagagggaa
cgtgaaattgacatcagagatagcaggagatttaaggataagaaagatgcagtggagcct
gaggctgatcctgagagggaccagagaactgtttttgcttaccagatgcctctaaaagca
actgagagagatgtctatgaattcttctcaaaagcaggcaaggtaagggatgttcggctg
atcatggatagaaattcaagaagatcaaagggggttgggtacattgagttttatgatgtg
atgtctgtgccaatggcaatagcattgtctggtcaactgcttcttggtcaacctgtgatg
gttaaaccttcagaggccgaaaagaatcttgttcagtccaatacttctggtgcaggcgca
ggtggtgttgctggaccatatggagctgttgatagaaaactatatgtagggaacttgcat
tttaatatgacagaaatgcagcttagacagatatttgaaccttttggacctgtggagctt
gtgcaactaccacttgaccttgagactggacagtgcaaaggttttgggtttgtccagttt
gctcaacttgaacatgcaaaagcagctcaaagtgccttgaacgggaaactggagattgtt
ggtcgaaccattaaggtttcatctgttacagatcatgttgttacccaagatgctacggca
aaatctgcagactttgatgatgatgagggtggtggcttggctttgaacgcacaatcaaga
gcgttgcttatgcagaaactggatcgctctggtattgcaacaagcattacgagctctctt
ggagtacccctcgttaatgggtctgctccaaatcaacaggcaacattacctgtcaatggc
caaggggcatttccagcaccagttctacagccaatcatgtctactacagcccttgaacct
attggacagcccagcgagtgtttgctgttgaagaatatgtttgatcctgcaactgagacg
gaacctgattttgatttggatattaaagaggatgttgaagaagaatgcagcaaatatggc
agggtgaagcatatttatgtggacaaaaacagtggcggttgtgtctatcttcgatttgat
tcgacggaagcagcgggtaaagctcaacgtgcaatgcacatgagatggtttgcaggcaga
tcaatatcagccttatttatgcaaccccatgaatatgaagcgaggtttaaaggttga
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