Gossypium raimondii: 105785422
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Entry
105785422 CDS
T04129
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gra
Gossypium raimondii
Pathway
gra00906
Carotenoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
105785422
Enzymes [BR:
gra01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
105785422
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
HI0933_like
Thi4
Pyr_redox_2
GDI
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
105785422
NCBI-ProteinID:
XP_012466957
UniProt:
A0A0D2QDH0
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Position
1:22422788..22427195
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AA seq
597 aa
AA seq
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MSLGCYQTVLFPTEGKSDFSSWNPLKNSQLKGNKISGVKFSNFQVSQRRKCIPMKLKSLL
SVDSAVEIEGKEGVNTGSKYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGY
YQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGREMEVIPDPTTVHFHLPNNLSVQVH
REYSEFINELMSKFPHEKEGILKFYGECWKIFNALNSLQLKSLEEPIYLFGQFFQKPLEC
LTLAYYLPQNAGDIARKYVKDPDLLSFIDAECFIVSTVNALRTPMINAGMVLCDRHFGGI
NYPVGGVGGIAKSLAEGLIDQGSEILYKANVTNIIIDQGKAVGVKISDGREFFAQTIISN
ATRWDTFGKLLKAENLPKEEENFQKVYVKAPSFLSIHMGVKADVLPPDTDCHHFVLENDW
TRLEEPYGSIFLSIPTVLDSSLAPKGRHILHIFTTSPLEDWEGLPPKDYEAKKELIADEI
IGRLEKKLFPGLKSSIVFKEVGTPKTHRRYLARDMGTYGPMPRQIPKGLLGMPFNTTGIS
GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPILDAALLGLLGWLRTLA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggttgttatcaaaccgttctgttccctacagaagggaagtcggatttttcg
tcctggaatccattgaaaaactcacaattgaaaggtaacaagattagtggtgtcaaattc
agcaactttcaggtcagtcaaaggagaaaatgcattcctatgaaattgaaatccctgttg
agtgtagacagtgcggtggagatagagggaaaggaaggagtcaatacggggagtaaatat
gatgcaatagttatagggtcagggataggagggcttgttgcagctacacaattggctgtt
aaaggagccaaggttttggtactggagaagtatgtgattccaggagggagttctgggtat
taccagagagatggatatactttcgatgtaggatcttctgtcatgtttggattcagtgat
aaggggaatctgaatttgataactcaagcattggctgcggtcgggcgtgagatggaggtg
attcctgatccaactacagttcatttccatctaccgaataacctttccgttcaagtacat
agagaatacagtgaatttatcaatgaacttatgagtaaatttccacatgagaaggaaggg
atccttaaattttatggcgagtgttggaagatcttcaatgccttgaattcgttgcaattg
aagtccctcgaggaaccaatctaccttttcggacagttctttcagaagcctcttgaatgt
ttgacacttgcttattatttgccccaaaacgctggagatattgctcgaaagtatgtgaag
gatcccgatttgttgtctttcattgatgctgagtgtttcatagtgagtacggttaatgct
ttgcgaacaccaatgatcaatgcaggcatggttctatgtgacaggcatttcggtggaatt
aattaccctgttggtggtgttggtggaatagcaaagtctttggccgaaggcctgatcgat
cagggtagtgaaatactttacaaggcaaatgtgactaacattataattgaccaagggaaa
gctgtgggagtgaaaatttcggatggaagggagttctttgcccaaaccataatatcaaat
gctactcgatgggatacatttgggaagctgttaaaagcagaaaaccttccaaaagaagaa
gaaaattttcagaaagtttatgttaaggctccatcatttctttccattcacatgggtgtt
aaggctgacgttctgcctcctgatactgattgtcatcattttgtgctcgagaatgactgg
acgagattagaggaaccatatgggagcatcttcttaagcattccaaccgttctcgattca
tcattggctccaaaagggcgtcatattcttcacatatttactacttctcctttagaagat
tgggaaggacttccaccgaaggactatgaggcgaaaaaggagctaattgctgatgaaatc
atcggaaggttggagaagaaactattcccgggactgaaatcatcaattgtttttaaggag
gtagggaccccaaagacacacagacggtacttggctcgtgacatgggtacttatggaccg
atgcctcgtcaaattcccaagggcttattagggatgccgtttaatacaacgggtattagt
ggtctttattgtgtcggtgatagctgctttccgggacaaggcgttatagcagttgctttt
tcaggcgtaatgtgtgctcatcgggttgctgctgatattgggcttgagaagaagtctcca
atattggacgctgctcttcttggattactcggttggttaaggacattggcttaa
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