Gossypium raimondii: 105785616
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Entry
105785616 CDS
T04129
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
gra
Gossypium raimondii
Pathway
gra04141
Protein processing in endoplasmic reticulum
gra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105785616
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105785616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gra03110
]
105785616
04131 Membrane trafficking [BR:
gra04131
]
105785616
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gra04091
]
105785616
Chaperones and folding catalysts [BR:
gra03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
105785616
Membrane trafficking [BR:
gra04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
105785616
Autophagy
ER-phagy
Other ER-phagy associated proteins
105785616
Lectins [BR:
gra04091
]
L-type lectins
105785616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
Nucleoside_tran
FAM176
CFAP143
PFF1_TM
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
105785616
NCBI-ProteinID:
XP_012467186
UniProt:
A0A0D2LV18
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All DBs
Position
7:48417517..48420911
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AA seq
535 aa
AA seq
DB search
MGRFALLLLLAFASFQALCFAADDDTAFYDSFDEPFDGRWIVSDKDDYKGVWKHSKSEGH
DDYGLLVSEKARKYAIVNELNEPVSLKDGSTVLQFETRFQNGLECGGAYLKYLRPQEAGW
KAKLFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKYPPSVPSDKLTHVY
TAILKPDNEVRILIDGEEKKKANFLSADDFEPPLIPAKTIPDPDDKKPEDWDERAKIPDP
NAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKID
NPKCETAPGCGEWKRPMKMNPAYKGKWSAPLIDNPNYKGIWKPQEIPNPDYFELDKPDFE
PIAAVGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDESTDSDG
LSGVQKKVFDVLYKVADIPFLSEYKLQILDLIEKAEKQPNITIGVIVSILVIILTVLFRL
LFGGKKQPKVEKNPEVAETSNNQSTSGEKAEEEEEEEEEEKEGTAAAPRRRRRDT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggggcgttttgctcttctcctcttactagctttcgcttcatttcaagccctttgcttc
gccgctgatgatgatacggccttttatgactcatttgatgagccatttgatggacgatgg
atcgtgtccgataaagatgattacaaaggtgtatggaaacattcaaagagcgaaggacat
gatgactacgggcttcttgtgagcgagaaggcacggaagtatgcgatagtgaatgagctc
aatgagcctgtgagtctcaaggatggaagcactgtgcttcagtttgagactcgctttcag
aatgggcttgaatgtggtggtgcatatttgaaataccttcgtcctcaagaggctggatgg
aaggctaagctatttgacaatgaatccccttactctatcatgtttggacctgacaaatgt
ggagccacaaacaaggttcacttcatcttgaagcataagaatcctaaaagtggggaatac
gtcgaacatcatcttaaatacccaccctctgtcccatctgacaagcttactcatgtgtac
actgcgatcttgaagcctgacaacgaggttagaattctgattgatggggaagagaaaaag
aaggctaacttcctctcagctgatgattttgagccaccacttatccctgctaagacgatt
cctgatccagacgataagaaacctgaggactgggatgagagagccaaaattcccgaccca
aatgctgtaaagccggatgattgggatgaggatgctcccatggaaattgaagatgaggag
gctgtgaaaccagaaggatggttagatgatgagcctgaggagatagatgatcctgaggca
accaagccagaagattgggatgatgaagaggacggtgagtgggaagcccccaaaattgat
aacccgaagtgtgagacagcccctggttgtggtgaatggaagaggccaatgaagatgaat
ccagcttacaagggaaaatggtctgctccactaattgataaccccaattacaagggtatt
tggaagcctcaagagattccaaaccccgactactttgagcttgataagcctgactttgag
cctattgctgctgttggtattgagatttggacaatgcaagatggcatattgtttgacaat
attttgattgccaaaaatgacaaggttgctgagtcatatagggagaccacatggaagcct
aagtttgaggttgagaaagaaaaacagaaggctgaggatgagtccactgattcagatgga
ctttcaggcgtccagaagaaggtctttgatgtcctttacaaggttgctgatattcctttc
ttaagtgaatacaagcttcaaatccttgatctcattgagaaggctgagaaacagccaaac
atcaccattggtgtcatcgtctccattttggtgattatcctcacagttctcttcagactt
cttttcggtggcaagaagcaaccaaaagtagagaagaatccggaggttgctgagacatca
aacaatcaatcaaccagtggagaaaaggctgaagaagaagaagaagaagaagaagaagag
aaagaaggaaccgctgctgctcctcgcagaaggaggcgtgacacttaa
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