KEGG   Gossypium raimondii: 105785616
Entry
105785616         CDS       T04129                                 
Name
(RefSeq) calnexin homolog
  KO
K08054  calnexin
Organism
gra  Gossypium raimondii
Pathway
gra04141  Protein processing in endoplasmic reticulum
gra04145  Phagosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105785616
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105785616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:gra03110]
    105785616
   04131 Membrane trafficking [BR:gra04131]
    105785616
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:gra04091]
    105785616
Chaperones and folding catalysts [BR:gra03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   105785616
Membrane trafficking [BR:gra04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    105785616
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    105785616
Lectins [BR:gra04091]
 L-type lectins
  105785616
SSDB
Motif
Pfam: Calreticulin DUF4834 Nucleoside_tran FAM176 CFAP143 PFF1_TM Phage_holin_6_1
Other DBs
NCBI-GeneID: 105785616
NCBI-ProteinID: XP_012467186
UniProt: A0A0D2LV18
LinkDB
Position
7:48417517..48420911
AA seq 535 aa
MGRFALLLLLAFASFQALCFAADDDTAFYDSFDEPFDGRWIVSDKDDYKGVWKHSKSEGH
DDYGLLVSEKARKYAIVNELNEPVSLKDGSTVLQFETRFQNGLECGGAYLKYLRPQEAGW
KAKLFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKYPPSVPSDKLTHVY
TAILKPDNEVRILIDGEEKKKANFLSADDFEPPLIPAKTIPDPDDKKPEDWDERAKIPDP
NAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKID
NPKCETAPGCGEWKRPMKMNPAYKGKWSAPLIDNPNYKGIWKPQEIPNPDYFELDKPDFE
PIAAVGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDESTDSDG
LSGVQKKVFDVLYKVADIPFLSEYKLQILDLIEKAEKQPNITIGVIVSILVIILTVLFRL
LFGGKKQPKVEKNPEVAETSNNQSTSGEKAEEEEEEEEEEKEGTAAAPRRRRRDT
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggggcgttttgctcttctcctcttactagctttcgcttcatttcaagccctttgcttc
gccgctgatgatgatacggccttttatgactcatttgatgagccatttgatggacgatgg
atcgtgtccgataaagatgattacaaaggtgtatggaaacattcaaagagcgaaggacat
gatgactacgggcttcttgtgagcgagaaggcacggaagtatgcgatagtgaatgagctc
aatgagcctgtgagtctcaaggatggaagcactgtgcttcagtttgagactcgctttcag
aatgggcttgaatgtggtggtgcatatttgaaataccttcgtcctcaagaggctggatgg
aaggctaagctatttgacaatgaatccccttactctatcatgtttggacctgacaaatgt
ggagccacaaacaaggttcacttcatcttgaagcataagaatcctaaaagtggggaatac
gtcgaacatcatcttaaatacccaccctctgtcccatctgacaagcttactcatgtgtac
actgcgatcttgaagcctgacaacgaggttagaattctgattgatggggaagagaaaaag
aaggctaacttcctctcagctgatgattttgagccaccacttatccctgctaagacgatt
cctgatccagacgataagaaacctgaggactgggatgagagagccaaaattcccgaccca
aatgctgtaaagccggatgattgggatgaggatgctcccatggaaattgaagatgaggag
gctgtgaaaccagaaggatggttagatgatgagcctgaggagatagatgatcctgaggca
accaagccagaagattgggatgatgaagaggacggtgagtgggaagcccccaaaattgat
aacccgaagtgtgagacagcccctggttgtggtgaatggaagaggccaatgaagatgaat
ccagcttacaagggaaaatggtctgctccactaattgataaccccaattacaagggtatt
tggaagcctcaagagattccaaaccccgactactttgagcttgataagcctgactttgag
cctattgctgctgttggtattgagatttggacaatgcaagatggcatattgtttgacaat
attttgattgccaaaaatgacaaggttgctgagtcatatagggagaccacatggaagcct
aagtttgaggttgagaaagaaaaacagaaggctgaggatgagtccactgattcagatgga
ctttcaggcgtccagaagaaggtctttgatgtcctttacaaggttgctgatattcctttc
ttaagtgaatacaagcttcaaatccttgatctcattgagaaggctgagaaacagccaaac
atcaccattggtgtcatcgtctccattttggtgattatcctcacagttctcttcagactt
cttttcggtggcaagaagcaaccaaaagtagagaagaatccggaggttgctgagacatca
aacaatcaatcaaccagtggagaaaaggctgaagaagaagaagaagaagaagaagaagag
aaagaaggaaccgctgctgctcctcgcagaaggaggcgtgacacttaa

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