Gossypium raimondii: 105785751
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Entry
105785751 CDS
T04129
Name
(RefSeq) YTH domain-containing protein ECT3 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105785751
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105785751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
105785751
NCBI-ProteinID:
XP_012467356
UniProt:
A0A0D2QF46
LinkDB
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Position
1:37842679..37849368
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AA seq
625 aa
AA seq
DB search
MLMAHQTSDRLTSTDSAEVFNVMVLDSNILANPNALTNKDLVTVGSLRDGSSHQSGFMPS
VVESKTTYLPNAYSPEAQFHQEAHKQGSLLPYVNAEGLDNGFHDIYNETASLGFHGFGHS
PQMQQRAYAPVSSYLPPVGDPIGLSNARHFITIDSSYHHPSVPQNIPHVTSKAQFSHLEC
PVNIEQQVVGKRFGLRTNYLPQLGSFDGGRNFFGSSSSLCSSYQGSDGFAVGGFCSDWSK
PFSGKSSLFHLSYAPASPKRVGSLEFSSNGPAVVSFQKGPFNGFGCTSSSSRGYSGSQSD
QRSCHGSVSTNSLGISGHNWPTLAEARQGGSCNDFSCSCTVTLDTLSERNRGPRAFKPKT
QITTKGFIVDSSQNGTINGITNGSYNRQNFVTDYEGAKFFVIKSYSEDNVHKSIKYGIWA
STPIGNKKLDTAYHEAKAIQGTCPVFLLFSVNSSAQFCGVAEMVGPVDFDKSVDYWLQNK
WSGQFPVKWHIIKDVPNSQFRHILLESNDNKPVTNSRDTQEVEFEQGIEMINIFKNYESH
SSILDDFYFYEERQKAMQERKARQLTSLVASDDLVCEASNFVSLPNDIVKKMSKSFAEVL
LLNENEKAGGGTGKVLSAACGGHVR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggctcaccaaacttctgatcgattgacctctactgactcggcagaggttttc
aacgttatggttctggatagcaacatccttgctaatccgaacgctttgactaataaggat
ttggtaactgttggttccttgagggatggttcatcccatcagtcgggattcatgccatct
gttgttgagtccaagacaacctatttgcccaatgcctattctcctgaggcacagttccat
caagaagctcataaacagggttcattgcttccatatgttaatgctgagggtttggacaat
ggttttcatgacatctacaatgaaactgcatctcttgggtttcatggttttgggcatagt
ccacaaatgcaacaaagagcttatgctccggtttcatcttatctgcctcctgttggggat
cctatcgggctgtccaatgcaaggcatttcatcaccatagattcatcttatcaccatcca
tcagttccccaaaatattccacatgttacttcaaaggcccagttttctcatttagagtgt
cctgtaaatattgagcaacaagtggttggaaaaagatttgggctgagaaccaattacctt
cctcagttaggatcatttgatggaggaagaaacttctttggaagctccagcagtctttgc
tcttcataccaagggtctgatggttttgcggttggtggattctgctcagactggtcaaag
ccttttagtgggaagagttctctgtttcatctctcatatgcaccagcttctccaaaacgg
gttggttcactagagttttcttcaaacggtcctgcagtggtttcttttcaaaaaggacca
tttaatgggtttggttgtactagctccagctctagaggctacagtggtagccaaagtgat
caacgttcttgtcatggtagtgtctctactaatagtttaggaataagtggtcataactgg
cctacgcttgctgaagcaagacaaggagggagctgcaatgacttctcctgcagttgtact
gtaacgcttgatacactaagtgagcgtaacaggggacctagggcatttaagccgaaaaca
cagataactacgaaaggttttattgttgatagcagccagaatggcacaattaatggcatt
accaatggatcctacaaccgacagaattttgtcactgattatgagggtgccaagttcttt
gtgataaaatcttatagtgaagataatgttcacaagagcattaagtatggtatctgggct
agcactccgatcggcaacaaaaaattagatactgcttatcatgaggcaaaagctatacaa
ggaacatgcccggtctttctcttattttcggtcaattctagcgctcagttttgtggagtg
gctgagatggtgggacctgttgactttgataaaagtgtggattattggcttcagaataag
tggtctgggcaattccctgttaagtggcacattattaaagatgtccccaatagtcagttc
cgccacattctactcgaaagtaatgacaacaagcctgttactaacagtagagatactcaa
gaggtcgagtttgaacagggcattgagatgataaacattttcaagaattatgaaagtcat
tcttcaatccttgatgacttttatttctacgaagagcggcaaaaagcaatgcaggaaagg
aaggccaggcagctaaccagcctagtggcttccgatgatttagtgtgtgaagcatcaaac
ttcgtctcactccctaatgatatcgtgaagaaaatgtccaagagctttgcagaagttctt
ttgttaaacgagaatgagaaagcaggcggaggaactggaaaggtgctctctgctgcctgt
ggaggccatgttagatag
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