Gossypium raimondii: 105785853
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Entry
105785853 CDS
T04129
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105785853
03400 DNA repair and recombination proteins [BR:
gra03400
]
105785853
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105785853
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105785853
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105785853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105785853
NCBI-ProteinID:
XP_012467491
LinkDB
All DBs
Position
1:41262560..41270422
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AA seq
945 aa
AA seq
DB search
MDSDSDSDGSHISATPPRDPLPPPRLPPQPPPKPPTSYKSTASTKRSSHLDIIFKLKKPS
SSKHDKIEPVPEPEPKVKPIQQPDLPSPVGNFPFQIRRPSDQPHPISIGRSLETLPAGFF
STRRASFSKICKPSLNFEPETLPEITAEPKINGSDGPGSTKTCNKKLPNLIRGDVPLPPV
KLQKRSEEGNFVRLNFNGYKRKFTAKGKKMNSYSYKSKYFKRSKRRVKSEVDTGSLCDEE
GLVSEIKLQSKAEKPSRCESVEAAISAVRNEVSDENLVRLLKALYGYDLFRDGQLEAIKM
ILAGKSTMLVLPTGAGKSLCYQIPAVVLLGITLVVSPLVALMIDQLKQLPPMIQGGLLSS
SQGPEEAAETLRMVQEGSIKVLFVSPERFLNADFLSIFSTLTSVSLVVVDEAHCVSEWSH
NFRPSYMRLRASLLRAKLNVECILAMTATATTTTLQSIMSALEISSTNLIQKSQVRDNLR
LSVSLSSNRMKDMLKLMKSSPFLGAQSIIVYCKFQSMYSSQAISNFYLHWILQSETDVIS
RYLCDNNISAKSYHSGMLARDRSRIQELFCANKIRVVVATVAFGMGIDKRDVGAVIHYSL
PESLEEYVQEIGRGGRDGRLSYCHLFFDDVTYYKLRSLMHSDGVDEFAVNKFLCQVFADD
TSSHRKVCSLVKESASRKFDMKEEVMLTLLTHLELGETQYLHLLPQLNVTCTLNFHKTSP
MLLADKDTAVAAILKKSEIKQGQYVFDIPTVANSIGVAPGDLSNHLQNLKAKGEITYELK
DPAYCYKIVKVPSDFCSLTELLTRWLLDIENCKVWKLDAMYSSAVFVVDTCEKTHDCNVA
QQTTCLQERILDYFKGDSNLDVLDKMGQNSPFLRADIKVFLQSNSNVKFTPRAIARIMHG
IGSPAYPSSTWSRTHFWGRYIQIDFKAVMNAAKAELMNFVGKDAP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggactccgattcagactccgacggatcacatatatcagccactcctccacgagaccca
ctcccgcccccgaggctgccaccacaaccgcctccaaaacctcctacctcctacaaatct
accgcaagtaccaaacgctcctctcatttggatatcattttcaaactcaaaaagccatct
tcgtcgaaacacgataaaatcgaacccgtacctgaacctgaacccaaagtcaaacccatt
cagcaaccggacctaccttctccagtcggcaattttcccttccagattcgccgtccgtcg
gatcaaccccatccaatctccattggccgttcccttgaaaccctccccgccggtttcttc
tccacgcgtcgcgcctccttctccaaaatttgtaaaccttccctcaatttcgaacccgaa
accttaccagaaataaccgccgaacctaaaattaatggctctgacggcccgggttctacc
aaaacttgtaacaagaagcttcctaatttgatcagaggagatgtccctttacctccagtt
aaattacaaaagcgcagcgaagaaggtaacttcgtgaggctcaatttcaatggctataaa
cgcaagttcacagccaaaggtaaaaagatgaatagttactcttacaaatcaaagtacttc
aaaagaagcaagagaagagtcaaatccgaagtcgatacgggaagcctttgcgacgaagaa
ggtttagtgtcggaaatcaagttgcagtcgaaagcagagaaaccgagtaggtgcgagtca
gttgaagcggcgatttcggcggttcgaaacgaggtgtcggatgagaacctggtgaggttg
ttgaaagctctgtatggctacgatttgttccgtgatggacagttggaagcgatcaagatg
attcttgctggcaaatcaacgatgctagttttgccaacaggagctgggaagtcgctttgc
tatcagattccggcagtggttttgctggggattacgttggtggtgagtccattggtggct
ttgatgattgatcaattgaaacagttgccccctatgattcaaggcggtctcttgtctagc
agtcagggacctgaagaggctgctgagacactgaggatggttcaagaagggagcataaaa
gtgctctttgtttcaccagaaaggtttttgaatgcagactttttgtcaatattttctact
cttacctctgtatcacttgtggtggttgatgaagctcactgtgtatctgaatggtcgcat
aatttccggccctcatacatgcggcttagggcatctttacttcgtgccaaactcaatgtt
gaatgcattcttgcaatgactgcaactgccacaaccacaactttgcagtctatcatgtca
gctctagagatttcttcaacaaatctcattcaaaagtcacaagttagggataatctacgg
ttatcagtgtctttgagcagcaatagaatgaaggatatgctaaagttgatgaagtcctct
ccttttttgggagctcaaagcattattgtttactgcaaatttcagtccatgtatagttct
caggccattagtaatttctacttgcactggattttgcagtctgaaactgatgtaataagc
aggtacttatgtgataacaatatctctgcaaagagttatcatagtggtatgctggcaagg
gatcgtagccgcatacaggagctattttgtgccaacaagattagagtggttgttgcaact
gtggcatttggcatggggattgacaagagggatgttggcgctgtaattcattatagcttg
ccagaaagcttagaagagtatgtccaggagattggtcgtggtggacgagatgggagattg
tcctattgccatctattttttgatgacgtcacatattacaagctccgtagtcttatgcac
agtgatggagtggatgaatttgctgtaaacaaattcctttgtcaagtttttgctgatgac
acaagttcacataggaaagtttgttccctggtcaaagaatcagcatctcgcaaatttgat
atgaaagaagaggtaatgctcacacttctaacacatctggagttgggtgaaacacaatat
ctgcatctgcttccacagctaaatgttacttgtactctgaatttccataagacttccccg
atgttacttgctgacaaggatactgcagttgcagccattttgaagaagtcagaaattaag
caagggcagtatgtgttcgatataccaactgtggcaaatagcattggggttgcacctggt
gatctatcaaatcacttgcagaatcttaaggcaaagggagaaataacatatgagttgaag
gatccagcctactgctataagattgtaaaggttcctagtgatttctgttctctcacggaa
cttcttaccagatggttactggatattgaaaattgcaaggtatggaaattggatgccatg
tacagttctgcagtttttgtagtggatacatgtgagaagacacatgattgcaatgttgct
cagcagacaacatgcttgcaagagagaattttggattattttaagggggacagtaacctt
gacgtccttgataagatgggtcagaacagcccttttcttcgagcagatataaaggtcttt
ctgcagagcaactcaaatgtcaagtttactccaagagctattgcaaggataatgcatgga
attggaagcccagcatatccttcttcaacttggtcaagaactcatttctggggaaggtat
atacaaatagatttcaaggcggtaatgaatgcagcaaaggcagaactcatgaattttgtt
gggaaagatgcaccttag
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