Gossypium raimondii: 105785909
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Entry
105785909 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105785909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105785909
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105785909
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
HECT type E3
105785909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
105785909
NCBI-ProteinID:
XP_012467556
UniProt:
A0A0D2NQD6
LinkDB
All DBs
Position
1:42991023..43000462
Genome browser
AA seq
1907 aa
AA seq
DB search
METRSRKRAEASSAAPSSSPSGPTTRSHKRARLSSSSSPAAATTTTPRSRTSRAAAALMD
STTTESSSGSRRDRRPSKANQTTTSDSPNLASDRGKEKERDPSARDRDRDRDRDRDRDRD
NRDNNSNNPERNLGLIMDTSGGDDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDD
LLPSSAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVD
SFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMD
LAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAS
DYVMEAVPLLTNLLQYHDSKVLEHASVCLTRIADAFASSPDKLDELCNHGLVTQAASLIS
TSNSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGISANSS
VPPALSRPAEQIFEIVNLANELLPPLPQGTISLPASSNMFVKGSILMKSPASSSDKQENS
DENAPKVSAREKLLNDQPELLQQFGVDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSS
AEMIQNLLSVTNISSFLAGVLAWKDPHVLVPSLQIAEILMEKLPGTFSKMFVREGVVHAV
DQLVLIGNQNATAAQASPLEKDNDSVSGTSSRSRRYRRRSGNSNPEGGSVEESKNQASLN
IGSPSNTIEIPTANSNIRAAVSACAKAFKDKYFPSDPGAVEVGVTDDLIHLKSLCMKLNA
GVDDQKTKAKGKSKASGSRLVDFSSSKEEYLIDVISEMLAELSKGDGVSTFEFIGSGVVA
ALLSYFSCGYFSQERVSDVNLPKLRHQALKRLKSFISVALPSSVDEGSIAPMTVLVQKLQ
NALSSVERFPVVLSHSSRSSGGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNIVMI
DPLASLAAVEEFLWPRVQRSDNAQKPCVSVGNSDSGNTPSGAVASSPSTSTPASTARRHS
SRSRSSVNIGDVARKESSQEKSTSSSKGKGKAVLKPAQEESRGPQTRNAARRRAVLDKDT
PMRPENGDSTSEDEELDLSPVEIDDALVIEDDDISDDEDDDHEDVLRDDSLPVCMPDKVH
DVKLGDSAEDGTTMPAASDNQTNAASGSSSRAAAVSGSDSADFRSSYGSRGAMSFAAAAM
AGFGSANGRGIRGGRDRQARPQFGNSNEPPKLIFTVGSKQLNRQLTIYQAIQRQLVLDED
DDERYGGSDFTSTDGRGMWSGIYTITYQRADTQADRTSVGGSGSAPASKSTKSCSPSSNS
DSQTHRMSLLDSILQGELPCDLERSNPTYTILTLLYVLEGLNQLATRLRAQIVSDGFAEG
KILNLDELSTPGSRVPYEEFINGKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFP
FETRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSA
AKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRSNSTWDKSIME
IDGDEEKNEKTAGSVGGDIVQAPLGLFPRPWPPNADASEGSQFFKVIEYFRLLGRVMAKA
LQDGRLLDLPLSTPFYKLVLGQELDLYDILSFDGEFGKILQELHFLVCRKQYLESTGGES
SAAVDELRFRGTPIEDLCLDFTLPGYPEYILKPGDGTVDINNLEEYISFVVDATVKAGII
RQMEAFRAGFNQVFDVASLQIFTPQELDYLLCGRRELWEAETLADHIKFDHGYTAKSPAI
VNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSAIAATSNGSGP
SESADDDLPSVMTCANYLKLPPYSSKEIMYKKLLYAINEGQGSFDLS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgcagccggaagcgggcggaggcctcctcagctgccccttcatcttccccc
tctggtcctaccactcgttctcacaaacgcgctcgtctctcttcttcctcatccccagcc
gctgcaactaccacaacgcctcgctctcgcacttcccgcgctgccgctgctttaatggac
tccaccaccaccgaatcttcctctggttcccgccgcgatcgccgtcccagcaaagctaat
cagaccacgacaagtgacagtccaaatctcgcctccgataggggcaaagaaaaggaacgt
gatccaagtgctcgcgatagagatagagatagagatagggatagagatagggatagggat
aatagagacaacaattctaacaaccctgagagaaatttagggttaattatggatacctct
ggaggcgatgacgatgataatgatagcgaaggcggtgtagggattttgcaccagaatctg
acgtcagcaagcagcgcgttacaaggcttgttgaggaagcttggtgccgggcttgatgat
ttgctgccgtcatcggctatgggttctgcatcttcttcccatcagagcgggaggttgaag
aagattctgtctgggttgcgtgctgatggagaggaagggaagcaagtggaggcgttgacg
cagctctgcgagatgctttcaattgggactgaggagtccttgagcacgttttctgtggat
tcatttgttcccgtgctcgttggattgcttaatcatgagagtaatcctgatattatgctt
cttgcagcaagggcgctgacccatttgtgtgatgttttgccttcttcatgtgctgctgtg
gtgcattatggtgctgtttcgtgtttttgtgccaggttgctcactatagagtatatggac
ttggctgaacagtctctccaagctttgaagaagatatctcaggaacacccaactgcctgt
ttgcgagctggtgctctcatggcagttctttcctacttggatttcttctccactggggtt
cagcgagtggcactatctactgctgcaaatatgtgcaagaaactcccttcagatgcatcc
gattatgtcatggaagctgtacctctattaacaaatctgttgcagtatcatgattcaaag
gtgctggagcatgcttctgtttgtttgactcgcattgccgatgcctttgcatcatccccg
gataaattagatgagctatgcaatcatggactggttactcaagctgcatctctcatttct
acaagtaactctggaggtgggcaggcatcattaagcacaccgacatatacgggcttaatt
cgactgctttcaacatgtgcaagtgggtctcctttaggagctaaaactttacttctgctt
gggataagtggcatacttaaagatatactatcaggttctggcatttctgccaactcatcg
gttccgccggcattaagcagaccagcagagcagatttttgaaattgtcaatctggcaaat
gaacttcttcctccgttgccacaaggaacaatttccctccctgccagctctaatatgttt
gtcaaaggatctattttgatgaagtctcctgctagcagctctgacaagcaagaaaattct
gatgaaaatgctcccaaagtttcagcccgagagaaattgttgaatgatcaacctgaactt
cttcagcagtttggagttgatctgcttcctgttctcatacagatctatggttccagcgtc
aatggcccagttcgccataaatgtctctcggttattggaaaactaatgtacttcagcagt
gcagagatgattcagaatttattgagtgtgacaaacatatcaagcttcttggctggtgtt
ttagcatggaaagatccacatgtcttggttccttccctccaaattgctgagatcctcatg
gaaaagcttcctggaaccttctccaaaatgtttgtcagagagggtgttgttcatgctgta
gatcagcttgtattaattggtaaccaaaatgccactgctgcccaagcatctcctcttgag
aaggataatgattctgtatctggaacgtcatcacgttccaggcgttacagacgacgcagt
ggaaactctaatcctgaaggaggttctgtggaggagtccaaaaatcaggcctctttaaat
attggctcaccttctaataccattgaaattcctacagccaattccaatattcgtgctgca
gtaagtgcatgtgctaaagcatttaaagataagtatttcccctctgatcctggggctgtt
gaagttggagtaacagatgatcttatacacttaaaaagtctctgcatgaaattaaatgct
ggtgttgatgatcaaaagactaaggcaaaaggaaaatctaaagcttcagggtctcggttg
gttgatttttcttctagcaaagaagagtacttgattgatgtgatttctgagatgctagca
gaactaagcaagggggatggtgtatccacatttgagtttattggtagtggtgttgttgcg
gccttgttaagctatttttcttgtgggtacttctcgcaggagagagtttctgatgtaaac
ctgcccaagcttcgtcaccaagcccttaaacgattaaaatcatttataagtgtggcactt
ccttcaagtgttgatgaaggaagtattgctcctatgactgtcctggttcagaagcttcaa
aatgctttatcatctgtagagcgtttccctgtagttcttagccattcatctaggtcttct
ggtgggagtgcacgcctctcttctggattaagtgcattgtctcagccttttaagttgcgg
ctttgtcgagcccaaggagagaagtctcttcgtgactattcttcaaatattgtgatgatt
gatccattagcaagtctagcagctgttgaagaatttctttggccacgagttcaacgtagt
gacaatgctcaaaaaccctgtgtgtctgtaggaaattctgactctgggaacacgcccagt
ggggctgttgcttcttctccatctacctcaactcctgcttcaaccgctcgtcgtcattct
tcaaggtccagatcatctgttaatattggagatgttgccagaaaggaatcatcacaggag
aaaagcacaagttcgtcaaagggaaaaggtaaggctgttttgaagcctgctcaagaggag
tcaagagggcctcaaacaagaaatgctgctcgtagaagagctgttctggataaagatact
ccaatgagacctgaaaatggtgactctacgtctgaggatgaagaattggatttgtctcct
gtggagattgatgatgctttggtgattgaagatgatgatatttctgatgatgaagatgat
gatcatgaagacgtgctcagagatgattctcttcctgtttgcatgccagataaagtacac
gatgttaaattgggagattcagctgaagatggcacaaccatgccagcagcaagtgataac
caaactaatgctgcttctggatcaagcagcagagctgctgctgttagtggttcagactct
gctgattttaggagtagttatggctcaaggggtgcaatgtcgtttgctgctgctgccatg
gctgggtttggatctgccaatggtagaggtattagaggaggtagagatcggcaagcacgt
cctcagtttggcaattctaatgagcctccaaagttgatttttactgttggtagtaagcag
ctcaaccggcagttgaccatctatcaggccattcaaagacagcttgtgttggatgaggac
gatgatgagagatatggtggtagtgatttcacatctactgacggaagaggaatgtggagt
ggtatctacacaataacttatcagagggcagacacccaagctgaccgaacatcagtaggg
ggttcaggttctgccccagcatctaaatccactaaatcgtgttctcccagttccaactct
gattcccaaactcatagaatgtcactattagatagcatcttgcaaggggaacttccttgt
gatctagaaagatctaatcctacttacactatcttgacactgttgtatgtattagagggg
ttgaatcagctggcaactcgtttgagagctcagatagtttctgacggttttgctgaagga
aaaattttaaatctggatgagttgagtacccctggttctagagttccttatgaggaattt
attaatggtaaactcactccaaaactggctcggcaaatacaggatgcccttgctctctgc
agtggaagtctcccttcctggtgttaccagttgacaaaggcatgcccctttttatttcct
ttcgagacacgaaggcagtacttctattcaactgcctttgggttgtctcgtgcgttatat
cgtctgcagcagcagcagggtgctgatggccatggatcaactaatgagagggaggtgagg
gttgggagattacagcgtcaaaaagttcgtgtctcccggaaccgcattttggattctgct
gcgaaggtaatggaaatgtattctagccaaaaagctgtgcttgaagttgaatattttgga
gaagttggcactggattgggtccaacgttggagttctatacactattaagtcatgatttg
caaaaggttggacttggaatgtggaggtctaattctacatgggataagtcaataatggaa
attgatggagatgaagagaaaaatgagaaaactgctggtagtgttgggggagatatagtc
caagctcctttggggttgttccctcgaccttggccaccaaatgctgatgcttctgaaggc
agccagttttttaaagtcatcgaatatttccggctacttggacgtgtgatggcgaaagct
cttcaagatgggcgacttttagacctgccactatcaacaccattttacaaacttgtgctt
ggtcaagagcttgatttgtatgatattctgtcttttgatggtgagtttgggaaaattttg
caagaactgcatttccttgtttgtcgaaagcaatatttggaatcgactggtggtgaaagt
agtgctgctgttgatgaattgcgcttccgtggtaccccgatagaagatctctgtttggat
tttacgcttccaggctatccagaatacatactgaaaccaggggatggcactgtggatatc
aataacttagaggaatacatatcctttgtcgttgatgcaactgtcaaggctggaattatt
cggcaaatggaggcatttcgagctggatttaatcaggtttttgatgttgcatcattacaa
atatttacaccccaagagttggactatttgctatgtggtcgcagagagttgtgggaggcc
gagacacttgctgatcatataaaattcgatcatggatatactgcaaagagccctgcaatt
gttaatttacttgaaattatgggagaatttacaccagagcaacagcgggccttctgccaa
tttgttactggtgcgcctagacttccacctggtggtctggcagtgctgaatccaaagctt
acaatcgttagaaagcattcgtcgtctgcaattgctgctacttccaatggaagtggaccc
tcagaatcagcagatgatgacttgcccagtgtcatgacttgtgctaattacttgaagctt
cctccatattcttccaaggaaattatgtataagaaattgctatatgcaatcaacgaaggg
caaggatcttttgatttatcatga
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integrated database retrieval system
