Gossypium raimondii: 105786021
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Entry
105786021 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105786021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105786021
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105786021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Smg4_UPF3
RRM_3
Motif
Other DBs
NCBI-GeneID:
105786021
NCBI-ProteinID:
XP_012467716
UniProt:
A0A0D2NQX4
LinkDB
All DBs
Position
1:45142657..45152444
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AA seq
232 aa
AA seq
DB search
MASRSSRTIYVGNLPLDVKEWEIEDLFYKYGHILDIELKLPSRPPGFCFVEFEDPLDAED
AIRGRDGYNFDGCRIRVELAHGGRGQSSRHDYGGGSSRGGRGRFSVSHRSEFRVVVRGLP
SSASWQDLKDHMRKAGDVCFAEVHQDGDGAMGIVDYTNYDDMKYAIRKLDDSEFRNPFAR
AYIRVNCYEASPRRGQSQSRSHIKSPRGNQRSVSKSRSPSPARLSRSRSRSN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcgttcttctcgcactatatatgttggtaacctacctctggatgtcaaagag
tgggagattgaagacctgttctacaagtatgggcacattttggatatagaattgaagctt
ccttcccgtcctcctggtttctgttttgtggagtttgaggaccctttggatgctgaagat
gcaattaggggtcgagatggctataattttgatgggtgtcgtatcagggttgaacttgcc
catggtggtagagggcaatcttctcgacatgattatggtgggggcagtagcagaggtggt
agaggacgatttagtgtttctcatcggtctgagtttcgagttgttgttcgcgggctgcct
tcttctgcttcatggcaagatctaaaggatcacatgcgtaaggctggagatgtatgcttt
gctgaagtccatcaagatggtgatggagccatgggtattgtggactacacaaattatgat
gacatgaaatatgcaatcaggaaactagatgattctgaatttcgaaatccttttgcaagg
gcttatattagggtgaactgctatgaggccagtcctcgcaggggtcaaagccagagtaga
agtcacattaagagtccaagggggaatcaaaggtctgtatcaaaatcgaggtcaccttca
cctgccagattatccagatcaaggtcaaggtccaactga
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