Gossypium raimondii: 105786150
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Entry
105786150 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105786150
04121 Ubiquitin system [BR:
gra04121
]
105786150
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105786150
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105786150
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105786150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-Nse
zf-ANAPC11
zf-RING_16
zf-RING_5
Zn_ribbon_8
zf-RING-like
DUF7560
Motif
Other DBs
NCBI-GeneID:
105786150
NCBI-ProteinID:
XP_012467922
UniProt:
A0A0D2NRF4
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Position
1:47151661..47154065
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AA seq
400 aa
AA seq
DB search
MYNNIYDGFVTLTQINQKKRKTSENQKKNMSLSPPRARVNGVDGANGANGANGAAPGRNY
QHYWCYQCHQFVRIASTNPPEEVVCPLCSGRFVCEMEINRPRMVVDFTAFDPSPEARLLE
ALSLFMYPPIRLFGLGISDNQEPQGRRWLRRPNNLLESEGENLPRERLRRRRSRSLDGTN
DREQEPESLGRPRTWIIVRQPGSFSLPEAEPTLPHEIPALPAPGLDPRNFFFGTGLNELI
EQLTQNDRPGVPPAPESTIHAIPTVKITESHLRDDSQCPVCKEEFKVGGEARELPCNHIY
HSDCIVPWLRLHNSCPVCRHELPVSSTDEQLPVSSTDELSSSDYFSEPEVSSNDGRRCWR
LRQLASNLWPFHRRHRRISPQTDVSPAVELESRSHRCCIL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtacaataatatatatgatggtttcgtaacccttacccaaataaatcaaaagaaaaga
aaaacatctgaaaaccagaagaagaacatgtctctaagcccacctagagctagggtcaat
ggggtagatggggccaatggggctaatggggccaatggtgcagcccctgggaggaactac
cagcattactggtgctaccagtgccatcaatttgttcggattgcctctacgaatcctccg
gaggaggttgtctgccccttatgttctggtcggtttgtttgcgagatggaaatcaacagg
cctaggatggttgttgacttcactgcttttgatccatcccctgaagctcgtctgttggaa
gcactctctctttttatgtatcctccaatcaggctattcggtcttggtatttctgataac
caagaacctcagggcaggcgttggttgagacgtccgaacaatttactagaatccgaaggt
gaaaatttgcctcgggagcgtcttcgtaggcgcagaagccgcagtttagatggaactaat
gatagagaacaagaacctgaatctctaggtcgtcctaggacttggattattgttcggcag
ccgggctcttttagcctacccgaagctgaaccaactttgccacatgaaatccctgcactc
cctgcccctggtcttgatccaaggaacttctttttcggaaccggactaaatgagttgatt
gaacaactgacacaaaatgacaggccaggtgtacccccagccccggagtcaactatccat
gcgattccgactgtaaaaatcacggaatcgcatctacgcgacgactcgcaatgtccagtg
tgtaaggaggaattcaaggttggtggagaggcaagggagttgccttgtaaccatatatac
catagtgattgcattgtgccttggttaaggcttcacaattcttgccctgtttgccgccat
gagttgccggttagcagtaccgatgaacaattgccggttagcagtaccgatgaactatct
agcagtgactatttttccgaacccgaggtttcttccaacgacggtagaagatgttggagg
cttaggcaactggctagcaatttgtggcctttccatcggaggcatcggagaattagccca
cagactgacgtgtctcctgcagttgaacttgaatcaaggtcgcatcgttgctgtattctt
tag
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