Gossypium raimondii: 105786174
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Entry
105786174 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105786174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105786174
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105786174
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105786174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-Di19
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
105786174
NCBI-ProteinID:
XP_012467963
UniProt:
A0A0D2QH79
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All DBs
Position
1:complement(47522971..47526039)
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AA seq
314 aa
AA seq
DB search
MAPGGNACKEVIESHSPVADYDIASAKSESNNATSTTTTATMKTSVNLVGKHGIHSNNGV
YELLECPVCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYDLGNIRCLALEKVAESL
ELPCKYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSDCSVTGDIPTLVSHLKDDHKV
DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMG
DDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLVIQRNLALYFSGGDRQ
ELKLRVTGRIWKEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcaacgcttgcaaagaagtcattgagtctcattcccctgttgcagat
tatgacatagcttcagcaaaatctgagagtaataatgccactagtactactacaactgca
acaatgaaaacttctgttaatttagttggaaaacatggaattcattcaaacaacggtgtt
tatgagctccttgagtgtcctgtatgcacgaatttgatgtatccaccaattcaccagtgc
ccaaatggacacactttgtgttcgaactgcaagattagagtgcacaactgttgcccaaca
tgccgctatgatcttggaaatataaggtgcttagctttggagaaagttgcagaatccttg
gaactcccttgtaaataccagaatctaggttgccaagatatcttcccctattacagcaag
cttaagcatgagcagcactgtcggttccgtccctacaattgcccttatgctgggtctgac
tgctctgtcacaggtgacatccccacccttgtttcacatctcaaggatgatcacaaagtc
gacatgcatgatggatgtaccttcaatcatcgatatgtcaaatcaaatccacatgaagtt
gaaaatgctacatggatgcttactgttttcaattgttttggaagacagttctgcttgcat
tttgaagctttccagcttgggatggcacctgtctatatggcctttttacgttttatggga
gatgataatgaagctaagaaattcagttacagtttggaggtcggtgccaatggccgtaag
ctaatatggcaaggaattccaaggagcattcgcgacagtcataggaaagttcgtgacagt
caggacggactggtgatccaaaggaacctagctctatacttctcgggtggtgataggcaa
gagctgaagttgagggtaactggccgtatatggaaagaagaatga
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