KEGG   Gossypium raimondii: 105786235
Entry
105786235         CDS       T04129                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
gra  Gossypium raimondii
Pathway
gra04136  Autophagy - other
gra04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    105786235
   04136 Autophagy - other
    105786235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gra04131]
    105786235
Membrane trafficking [BR:gra04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    105786235
   mTORC2 complex
    105786235
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C DSE1_N Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_WDR41 CFAP251_N Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_DCAF4 ASA1 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_HPS5 NBCH_WD40 ANAPC4_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_WDR35_TULP_N PAC11 CFAP43_N AF_1625_C DmsR_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 105786235
NCBI-ProteinID: XP_012468041
UniProt: A0A0D2QAP4
LinkDB
Position
1:48538104..48543107
AA seq 325 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSSSPQPVMSYDSHTNNVMAVGFQCDGKWMYSGSEDGTVKIWDLRAPGCQREYESRG
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGNQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITEMVKLLHPWVSKPNPWFPSKIKEKIF
IYHLRLPPPPAPFCSLFLFNWSHFG
NT seq 978 nt   +upstreamnt  +downstreamnt
atgacacaaccgtcggtcatactagcaaccgccagctatgatcacactattcgattttgg
gaggcaaaaagcggccgctgttaccgtactattcaataccccgattctcaagttaatcgg
cttgaaataaccccagacaagcgctacttggctgcagctggtaatcctcacattcgtttg
ttcgatattaattccagcagccctcaacctgtaatgagctatgattcgcatacaaataat
gttatggctgtaggatttcaatgtgatggaaagtggatgtattctggttctgaggatggc
actgtaaagatttgggatttaagagctcctggttgccaaagggaatatgaaagtcgtggt
gcagttaacaccgttgtcttacatccaaatcagaccgagttgatatctggtgaccagaat
ggtaacattcgtgtatgggatttgacagctaattcttgcagctgtgaattggtgcccgag
gttgatacagctgtgaggtctcttacagtcatgtgggatggaagcttggtagttgctgca
aataatcatggtacctgttatgtttggcgcctattaagaggaaaccagactatgaccaac
tttgagccacttcacaagctacaagcacataatggatacatactcaaatgtctcctttct
cccgagttttgtgaaccccatagatatttggctactgcatcttctgaccacactgtcaag
atatggaatgtcgatggcttcacattggagaaaacattgataggacatcagcgctgggta
tgggactgtgttttctctgtggatggtgcatatctcataacagaaatggttaagctgctc
catccttgggtttccaagcctaatccatggttcccttccaagatcaaagaaaagatattc
atataccatcttaggctccccccccccccggccccgttttgctctctatttctgttcaat
tggagccattttggttga

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