Gossypium raimondii: 105786260
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Entry
105786260 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105786260
03041 Spliceosome [BR:
gra03041
]
105786260
03036 Chromosome and associated proteins [BR:
gra03036
]
105786260
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105786260
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105786260
mRNA cycle factors
Common to processing body (P body) and stress granule
105786260
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105786260
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105786260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105786260
NCBI-ProteinID:
XP_012468074
UniProt:
A0A0D2QAY1
LinkDB
All DBs
Position
1:complement(48788012..48791669)
Genome browser
AA seq
620 aa
AA seq
DB search
MTTSWADSVANSASETVVSDNNSLRRPTRSTYVPPHLRNRPSSDTHNLSGPVTERTSFNG
TTGVSQWSRPSIGGGGGGTKPEIGRQGQVYGSSGRGGGGWNNRSGGWNRREREVNPFDDN
DEADVKDQACGEQENSGINFDAYEDIPVEISGENVPPPVNTFVDIDLGELLNQNIRRCKY
VKPTPVQRHAIPIVLGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTVYPL
ALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPNRGVRQTMLFSATFPRE
IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRENGAHGKQA
LTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNEGNLSMARPLAELMQE
ANQEVPAWLTRYASRAPYGGNKNRRYGGGGGRFGGRDFRREGSVGRNLDHYGGGNSGTAY
GVPGNYGGGGYAPGMTSAWD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcatgggcagattctgtagcaaactctgcatctgaaactgtagtttcagac
aacaattccttacgtcgtccaactcggtccacttatgtcccgccccaccttcgtaaccgt
ccatcttccgacacacataacctttcaggaccggttactgagaggacaagttttaatggt
accaccggcgtgtcccaatggtcccggccaagcattgggggcggtggcggcgggactaag
cccgaaatagggcgtcagggtcaggtatatggctcttctggacgtggtggtggtggttgg
aacaatagaagtggtggttggaataggagagaaagggaagtaaatccatttgatgataat
gatgaagctgatgttaaggaccaagcatgtggtgaacaagagaattcggggatcaatttc
gatgcttacgaggacattccggtggaaattagtggtgaaaatgtgccaccgcctgtaaat
acatttgttgatatagatttaggggagcttttgaatcaaaacattaggagatgcaagtat
gtgaaaccgactccagttcaacgacacgctatccctatagtattaggaggtagagattta
atggcttgtgctcaaacagggtctgggaagacagctgctttctgctttccaattattagt
ggaattatgcgggaacagtatgtacagagaccgcgtgtagcacgaactgtttaccctctt
gctctcattttatctcccacaagggagctctcttgtcaaatacacgacgaggctaaaaaa
ttctcatatcaaactggtgtcaaggttgtagttgcctacggaggggcaccaattacccaa
cagttgcgagagctggagagaggagttgatattctagtggcaactccagggcgattggtt
gatttgctagagagggctagagtatcattgcagatgataagatacttagcgctcgatgag
gcagatcgtatgcttgatatgggtttcgagccacaaatcaggaagatagtggaacaaatg
gacatgcctaatcggggtgtgcgacagacaatgttgtttagtgccacctttccaagagag
atacagagacttgcatctgattttcttgcaaattacatatttttggctgttgggagggtt
ggttctagcacggatttgattgttcaaagggttgaatttgttcaagagtctgataaaaga
agtcatctcatggatcttctgcatgcacaaagggaaaatggagctcatggaaagcaagct
ttgacattagtttttgtggagacaaaaaaaggagctgactcattggaacattggttgtgc
atgaatggattcccagcaaccactatccacggtgataggactcaacaggaaagggaacta
gcattgagatctttcaagagcggaaagaccccaattttagtggcaacagatgtggctgct
cgtggtcttgatataccccatgtagctcacgtggtcaactttgatctccctaatgacatt
gatgattacgtccatcggattggaaggacagggcgtgccggtaaaacaggattggcaaca
gctttctttaacgaaggcaatttgtcaatggcaaggccgctagctgagctaatgcaagaa
gcaaatcaagaggtacctgcatggctcacccgatatgcatcccgggctccttatggtggt
aataaaaaccgacgatatggaggaggaggagggcgttttggtgggcgtgatttcagaagg
gagggttcagtcggtaggaacctagatcactacggcggaggtaatagtggcactgcatac
ggagttcctgggaattatggtggaggaggatatgctccgggaatgacaagtgcttgggat
tag
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integrated database retrieval system
