Gossypium raimondii: 105786427
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Entry
105786427 CDS
T04129
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105786427
03400 DNA repair and recombination proteins [BR:
gra03400
]
105786427
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105786427
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105786427
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105786427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
AAA_16
DUF1980_C
cobW
MCM_N
AAA_30
AAA
AAA_7
CDC24
Motif
Other DBs
NCBI-GeneID:
105786427
NCBI-ProteinID:
XP_012468299
UniProt:
A0A0D2RCB0
LinkDB
All DBs
Position
1:complement(50946942..50956304)
Genome browser
AA seq
793 aa
AA seq
DB search
MFGSHGERSIEKYGSINASNVGSIVPVYFTENEYSKDEEKLIFDLIRFFSASPGKDLADQ
VKDDCGAVSLSLDYQRFRRLCDIEEFYAKMEDKPKIALSCMSAAIHQVLLNNQDFYLEEG
KKINIRLHNYPESMTVLKNLKAAYIDKLVSVRGTVVKASNVKPLVIKMNFACEKCATEIP
RSFPDGKFSPPSACTIHGCKSRTFKPIRSSAQAIDFQKIRLQELLKSEDHEEGRVPRTVE
CELTEDLVDLCIPGDVATVTGIIRVINNYMDIGGGKSKGRNQGFYYLYIEAVSIKNSKSL
SVTEDMEDSNSDARAKELVDLFSFSPRDLEFIVKFSKEHGSDVFRQILQSICPSIYGHEL
VKAGITLALFGGVRKHSMDRNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCG
NATTNAGLTVAVVKDTMTSDYAFEAGAMVLADGGLCCIDEFDKMSAEHQALLEAMEQQCV
SVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSPALLSRFDLVFILLDKPDE
QLDKQLSEHIMSLHAGYGESSPALKKPRIAKAAQNVEAITMRVKGGSLVSRLRLDPKKDA
DFVPLPGALLRKYISYARTYVFPRMSKPAAEILQKFYLQLRDRNTAGDGTPITARQLESL
VRLTQARARVDLREEITVQDAKDAVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRF
LSALNKQSELQQKDCFSISEIYSLADRIGLRVPDIDTFVDNLNSVGYLLKKGPKAYQVLS
SSYSRSQPSRSRC
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatctcacggggagagatcaattgaaaaatacggttcgattaatgcaagcaac
gttggctctatcgttcccgtttatttcaccgaaaacgagtactccaaggacgaagaaaag
cttatttttgacctcattcgtttcttctccgcttctccagggaaagatcttgctgatcag
gtaaaggatgactgtggtgccgtttctttgtctcttgattaccaacgatttcgaagatta
tgtgatatcgaagaattctatgccaaaatggaagataagcctaaaatagctctctcatgc
atgagtgccgctattcaccaggttttattaaacaaccaggatttctacttggaggaagga
aagaagataaatattcgtctgcacaactaccctgaatccatgactgtcttgaagaactta
aaggcagcatatatcgacaagcttgtatctgtgcggggtacagtggtaaaagctagcaat
gtcaagcctcttgtgattaaaatgaattttgcctgtgaaaaatgtgcaaccgagattcct
cgttcatttcctgatggaaagttttcgccaccatcagcttgtactatacatggctgcaag
agcagaacattcaaaccaattcgatcctcggctcaagcgatagattttcagaagataagg
ttacaggagctgctgaagtctgaggatcatgaagaaggtcgtgtccctcgaacagtagaa
tgtgaattgactgaagatcttgttgatctttgcatccctggagatgtagcaacagtcact
ggaattataagagttatcaacaattacatggatattggaggaggaaaatcaaaaggcaga
aatcaaggattttactatctgtacatagaagcagtttctataaaaaattctaagtcgctc
tctgtgactgaggatatggaagattccaatagtgatgctagagcaaaagagctagttgat
ttgttctctttctctccaagggatttggaatttattgtgaagttttcaaaagagcatggt
tcagatgtctttcgccaaatacttcaatccatatgtccatccatctatggacatgagctt
gttaaagctgggataactttggcgttgtttggtggagtacgaaaacattcaatggatcgg
aataaggtcccagtcagaggagacatccatgtcattgttgttggtgatccaggtctaggg
aagagccaactgctgcaagcagcggctgctgtttccccacgtggtatatatgtttgtggc
aatgccaccactaatgctggtttaactgtagctgtagtgaaggacactatgacaagtgac
tatgcttttgaggctggagccatggtactggcagatggtggactatgctgtatagatgag
tttgataaaatgtctgctgaacatcaggctttactggaagcaatggaacaacagtgtgtt
tctgttgcaaaagctggactggtagcaagtttatctgctcgaacatctgtcttagcagca
gcaaatcccgttggtggtcattataaccgtgcgaaaacagtcaatgaaaatttgaaaatg
agtccagctttgctctcaagatttgatttggttttcatattgcttgataaacctgatgag
cagctggacaagcaactttcggagcacataatgtcacttcatgcaggatatggagaaagt
tcaccagcactgaaaaagccacgtatagctaaagcagcacaaaacgttgaagcaataact
atgagagtgaaaggaggttctttagtttctaggctgagacttgaccccaaaaaggatgct
gattttgtcccattgcctggtgcacttcttcgcaaatatatttcttatgcaagaacatac
gtcttccccaggatgtccaaaccagcagcggaaatcctgcaaaaattctacttacaacta
agagaccgcaatacagctggtgatggcacgcctataacagcgagacaattggagagtctg
gttagactaacacaagctcgagcacgagtggatttgagagaagaaataacagtccaagat
gctaaggatgcagttgaaataatgaaagaatccctgtacgataagtatgttgatgagcat
ggatttgtggattttggtcgaagtgggggaatgagtcaacaaaaagaagcaaagcgcttt
ttaagtgctttaaacaagcaatcagagttgcaacaaaaagattgcttctccatatctgaa
atctacagtttggcagatagaattgggttaagagttcctgatattgacacatttgtggat
aacttaaacagtgtaggttatcttcttaagaaagggccaaaggcataccaggtgttatca
tcatcatattcaagaagccaaccatcaagatcaagatgctaa
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