Gossypium raimondii: 105786431
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Entry
105786431 CDS
T04129
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K03231
elongation factor 1-alpha
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105786431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105786431
03016 Transfer RNA biogenesis [BR:
gra03016
]
105786431
03012 Translation factors [BR:
gra03012
]
105786431
04131 Membrane trafficking [BR:
gra04131
]
105786431
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105786431
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105786431
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105786431
Translation factors [BR:
gra03012
]
Eukaryotic type
Elongation factors
105786431
Membrane trafficking [BR:
gra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
105786431
Exosome [BR:
gra04147
]
Exosomal proteins
Proteins found in most exosomes
105786431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
FlpD
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
105786431
NCBI-ProteinID:
XP_012468306
LinkDB
All DBs
Position
1:51011150..51013785
Genome browser
AA seq
516 aa
AA seq
DB search
MSSMSRWIIFNPTGKKETLVKPKLNHWLLKLKEAASLTCFLLSFQLLRGEPFLCSDSQLV
FSLSLQSFIMGKEKVHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK
RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC
AVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARFDEIV
KEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQITEPKRPSD
KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHESLPEAF
PGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDC
HTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR
FAVRDMRQTVAVGVIKSVEKKDPTGAKVTKSAAKKK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtatgagccgttggattatctttaatccaacgggtaagaaagaaaccctagtt
aaaccaaagttgaatcactggctacttaagctaaaggaggctgcctccctcacttgcttt
ctactttcatttcagctattacgtggagagccttttttgtgtagcgattctcagttagtc
ttctctttaagcttacagagttttataatgggtaaggagaaggttcacatcaaccttgtt
gtcattggccatgtcgactctggcaagtcgaccactaccggtcatttgatctacaagctt
ggtggtattgacaagcgtgtgattgagaggttcgagaaggaggctgctgaaatgaacaaa
aggtcattcaagtatgcttgggtgcttgacaagcttaaggctgagcgtgaacgtggtatc
accattgatattgccctgtggaagtttgagaccaccaaatactattgcaccgttattgat
gcacctggacaccgtgactttatcaagaacatgattaccggtacctcacaggctgactgt
gctgttctcattattgactcgaccactggtggttttgaagctggtatctctaaagatggt
cagactcgtgagcatgctttgcttgcttttaccctcggtgttaggcagatgatttgctgc
tgcaacaagatggatgcaacaaccccaaagtactcaaaggcaaggtttgatgaaattgtc
aaggaagtctcttcttatcttaagaaagttggttacaaccctgagaagatcccatttgtc
ccaatctccggttttgagggtgacaacatgatcgagagatctacaaacctcgattggtac
aagggtcctactctccttgaggctcttgaccagatcaccgagcccaagaggccctcggat
aagccactccgtcttccacttcaggatgtctacaagattggtggtattggaactgtccct
gttggtcgtgttgaaactggtgtcctcaaacccggtatggttgttacttttggtcctact
ggtctgaccactgaagttaagtctgttgagatgcaccatgaatccctcccggaagctttc
cctggtgacaatgttgggttcaacgttaaaaacgttgctgttaaggatcttaaacgtggt
tttgttgcttcaaactccaaggatgatccggccaaggaagctgccaacttcacctctcag
gttatcatcatgaaccaccctggccaaattggaaatggttatgccccagtcctcgactgc
cacacctctcacattgctgtcaaattttccgaactgttgaccaagattgacagacgatct
ggcaaggaactcgagaaggaacccaagttcttgaagaacggtgatgcaggtatggtaaag
atgattcccaccaaacccatggttgttgagacattctctgaatacccaccacttggacgt
tttgctgtccgtgacatgcgccagactgttgccgtcggtgtcatcaagagtgttgagaag
aaggacccaactggtgctaaggtcaccaaatctgctgccaagaagaaatga
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