Gossypium raimondii: 105786568
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Entry
105786568 CDS
T04129
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105786568
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105786568
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105786568
Protein phosphatases and associated proteins [BR:
gra01009
]
HAD phosphatases
Fcp/Scp phosphatases
105786568
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105786568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
105786568
NCBI-ProteinID:
XP_012468527
UniProt:
A0A0D2RD48
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Position
1:52107803..52115242
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AA seq
865 aa
AA seq
DB search
MSRLGFKSMVYHGDFFLGELNTIPITDSNFQFPNNEIRIHHISPTSERCIPLSILHTISS
FPVRCKLESPFPVEQPHLIHLHASCFYEFKTAVVLVGDEEVHLVAMPSKQKKFPCFWCFS
VSTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEVLRGWIARESDPIRLSGM
SAELRRYIDDRLLLKQYAESDCVVDNGKMFKVQMEEVPPLSDGHEKVVRPVIRLQDRNIV
LTRINPEIRDTSVLVRLRPAWDELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGA
HLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVPP
FAPYYAPQAETANAVPVLCVARNVACNARGLFFKEFDENVLRKMSEVFYEDEVVNLPLAP
DVSNYLMSEEASFASNGNNGAPICEGMNGAEVERRMNQSEEKHVLDSSTRPVTNNPELRS
ETSQPPVTDIVGPASSVAPLPSQKPSILGAPGLLSNPMMLGASVRRDNNGSEGDYDMKRR
ALGIKQSLDLRNQSSIQPPLLPKFPIQTSSSSVVPQGGWLVEEDINESHLNDRPSGTTQE
SDVLKSDKLRGYQNPFPHTAPGSVSTGLPSYASQVKIEEARTGLDTPKQNVLPTAHLSEI
GGTQNHLPSITRELQSEGGKMNLLPSHLSIGVLQEIGRRCGSKVEFRSVVSTSKDLQFSV
EVLFTGEKIGVGMGKTRRDAQQQAAELALHNLAEKYVAYIAPRSGAVDRDFNNLSLGTEN
GFLWDVNPASNEAIKEGFPKDNTSEAAEEPGSNSSSIANQPVEKRANSPRFSESMPSKRS
KEGVLRRLGSSLSSSRQPKNEHTIS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttaaatccatggtgtatcatggagacttttttttgggtgaactg
aacactatccctatcacggactcgaatttccagttcccgaataacgagattcgtatccac
cacatctcccctaccagcgaacgatgtattcctctttcgattctccacacgatttcctca
tttcccgttcgttgcaagctcgaatccccttttcccgtagaacagccgcatttgattcat
cttcacgcctcttgcttttacgaattcaagacggcggtggttttggttggagatgaagag
gtgcacttagtggcaatgccgagtaaacagaagaagtttccttgtttttggtgcttttcg
gtctctacgggactgtacaattcttgcttagggatgcttaacttgaggtgtctcgcgatt
gttttcgatctcgatgaaacgttgattgttgccaacacgatgaagtcgtttgaggatagg
atcgaagtgcttaggggttggattgcgcgggagagtgatccgattcgtctttcagggatg
tcggctgaattgagaaggtatatagatgatcggttgctgttgaagcagtacgcggagagt
gattgtgttgttgataatggaaaaatgtttaaagttcagatggaagaggttccacctttg
tctgatggccatgagaaagttgttcggcctgtgattaggttgcaggacagaaatattgtg
cttactcgtatcaatcctgagattcgggataccagtgtgctggtgaggttacgaccagcg
tgggatgaattgagaagctatttgactgcgaaaggacgaaagcgctttgaagtatatgtt
tgtactatggctgaaagagattatgcattagagatgtggaggcttcttgatcctggggca
catctgataggttcaaaacaactactggaccgagttgtttgtgtcaaatctggttccagg
aaatctttgctaaatgtgttccgtgatggcaagtgccatccacagatggcaatggtaatt
gatgatcgttcaaaggtctgggaggataaggatcaacctcgagttcatgtagttccccca
tttgctccgtattatgctcctcaggcggagacagcaaatgcagttccagtcctctgtgtg
gcaagaaatgttgcatgcaatgccaggggtttgtttttcaaagagtttgatgagaatgta
ttgcggaagatgtctgaagttttttatgaagatgaggtggtaaatctgcctcttgcccct
gatgtgagcaactatttgatgtcagaggaagctagttttgcttcaaatgggaacaatgga
gctcctatctgtgaaggaatgaacggagctgaagttgagcggaggatgaatcagtctgag
gagaagcatgttttggactcttccactcgtccagttacaaataaccctgagttgcggtct
gaaacctctcagcctcctgttacagatattgttggtcctgcatcttcagtagcaccattg
ccttctcagaaacctagtatacttggagctcctggtctgctttcaaatcctatgatgctt
ggagcttctgtaagaagagataacaacggtagtgaaggtgattatgacatgaagagaaga
gcccttggcataaaacagagtttagacttaaggaatcagagctcgatccaacctccactc
ctacctaaatttccgatacagacatcatcatcatcagtagtgcctcagggaggttggttg
gtggaagaagacatcaatgaatcgcatctaaatgatcgaccatcaggcactacacaagaa
tctgatgtattaaaatctgataaattgcgaggttatcagaatccgtttcctcatacagca
cctggttctgtttccactggtttaccatcgtatgcatcccaagtgaagattgaagaggca
cgtactggacttgatacaccgaagcagaatgttctgcctactgctcatttatcagagata
ggtggaactcagaatcatctgccttctattactagagaattgcagtctgaaggtggaaaa
atgaatcttctaccctcccatttgtcgataggtgttctacaagaaattggacgaagatgt
ggttcaaaggttgagttcaggtctgtggtaagcaccagtaaggatttgcagttttctgtt
gaggttttgttcactggggagaagattggtgttggaatgggcaagacaaggagggatgct
cagcagcaagctgctgagcttgctcttcataatttagcagaaaaatatgtagcatatata
gcgcctcgttcgggagctgtggatagagatttcaataatctctctcttggaactgaaaat
ggatttctatgggacgtgaatcctgcatcaaatgaagcaataaaagaaggttttcctaaa
gataatacttctgaggctgctgaagaacctgggagtaattcatccagtatagcaaatcaa
ccagttgaaaaacgtgcgaattctccaagattttctgaatctatgccgagcaaacggtca
aaggaaggagttctgcgtcgattaggaagtagtctatcatcctcacggcaaccgaaaaat
gagcataccatttcatga
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