Gossypium raimondii: 105786634
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Entry
105786634 CDS
T04129
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105786634
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105786634
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105786634
NCBI-ProteinID:
XP_012468607
UniProt:
A0A0D2PV48
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Position
7:47245331..47248410
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AA seq
401 aa
AA seq
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MAIPSLSLLFLFTSLPLFSSSPVKDPELVVQDLHRAINVSRRNLKYLSCATGNPIDDCWR
CDPNWEKNRRRLADCAIGFGKNAIGGRDGKLYVVTDSSDDDPVNPKPGTLRHAVIQDEPL
WIVFARDMTIQLKEELIMNSFKTIDGRGASVHITGGPCITIQFVTNIIIHGLHIHDCKQG
GNAMVRDSPRHYGWRTTSDGDGVSIFGGSHIWVDHNSLSNCKDGLIDAIYGSTAITISNN
HMTHHDKVMLLGHSDSYMKDKNMQVTIAFNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEM
YAIGGSANPTINSQGNRFTAPNDIFSKEVTKHEDAPESEWKNWNWRSEGDLMVNGAFFTR
SGAGASSSYAKASSLGARPSSHVATITTNAGALNCKKGSRC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccttcactttctcttctcttccttttcacctctcttcctcttttttcctct
tccccggttaaagatcctgaacttgtagttcaagatcttcacagggccattaatgtgtct
aggaggaaccttaagtatctctcttgtgcaactggtaaccccatagatgattgctggaga
tgtgaccctaactgggagaagaacagacggaggctagccgactgtgcaatcgggtttggc
aagaatgccattggtggaagagacggtaaactctacgttgtcactgattctagtgatgat
gatcccgtgaatccaaaacctggaactttaagacacgctgtgattcaagacgaaccgttg
tggatcgtgttcgctcgtgatatgaccattcaattgaaggaagaactcattatgaactct
ttcaaaacaattgatggcagaggtgctagtgttcacattactgggggtccatgcattacc
attcagtttgtgaccaacattatcatccatggattgcacattcatgattgcaaacaagga
gggaatgctatggtgagggactccccgcggcactacggttggcgaacgacatcagatggt
gatggtgtgtccatctttggtggtagccatatttgggtggatcataactcgttatcaaac
tgcaaggatggtctgattgatgctatttatggatccactgccatcaccatttcaaataac
cacatgactcaccatgataaagttatgttactagggcacagtgattcctatatgaaagac
aagaacatgcaagtcaccattgcctttaatcactttggtaaagggctcatccaaagaatg
ccaagatgtagacatgggtatttccatgtggtgaacaatgactacacccattgggaaatg
tatgcaattggagggagtgctaatccaaccatcaacagccaagggaatagatttactgca
ccaaatgatatattcagcaaagaggtgaccaagcatgaagatgcgcctgagagtgaatgg
aagaactggaactggagatcggaaggcgatctgatggtaaatggtgcgtttttcacacgg
tcgggtgctggtgcatcttcaagctatgccaaggcctctagcttgggtgctaggccatca
tcgcatgtcgctacgataacaactaatgccggtgcacttaattgcaagaaaggctctcgt
tgctga
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